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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.18G182400.2.p |
Common Name | GLYMA_18G182400, LOC100801280 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 604aa MW: 67340.8 Da PI: 9.7671 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.18G182400.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.3 | 7.4e-08 | 511 | 560 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +++ E e lv+av++lG+g+W+ + ++ k+Rt ++k++w ++
Glyma.18G182400.2.p 511 RRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFdhaKHRTYVDLKDKWKTL 560
567888999**********************99**************986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0031627 | Biological Process | telomeric loop formation |
GO:0000783 | Cellular Component | nuclear telomere cap complex |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 604 aa
Download sequence Send
to blast |
MVLQKRLNYG FNGYQVPVIP RASRSARGRG TIRKKPDSSQ IQAFEILASV AGNFLQENES 60 SNPENVVLAK DPRTLSGTNI KDKHGDERSF KGALFEHGAC SEIASVFVPS MQGKHDNHRV 120 MGDSSFLDNH LEGQGQNVPE REDERIKGRS VNGKTIHIKG CSNGLIEPGH GVSKHCSSAN 180 NVEKPSLEGR KPLDSFPKCF TSRKLVNRDD DETLDRCTQL NSKNNTSGAP PDTPKLKDAS 240 PFISDENNSR DISELESLQR MYPFKKRKFF NQTSSSASDR GSQCQGMFDS SDTIRVNGTN 300 HAIEESSSIV GQQAHFGSRG CNVKLSIKSF KVPELFIDIP ETATIGSLKR TVMEAVTAIL 360 GDELHVGILL QGKKVRDDSK TLIQTGISQD DKRHRLGFML EPRHTQSPSS YNDDPCYPTT 420 SSRQKLSRQS TSVTLQQGTY NVSKERSMIK IESYAEGDLN MVTSLADTSA NNNMSKCRAL 480 VAVPAINMET LAVVPFRRKS ENPDFAQRRI RRPFSVLEVE ALVQAVEKLG TGRWRDVKQR 540 AFDHAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL LDRVLAAHAY WSQQQCKHQL 600 KPL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 258 | 267 | QRMYPFKKRK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP006362 | 1e-114 | AP006362.1 Lotus japonicus genomic DNA, chromosome 1, clone: LjT34B12, TM0147a, complete sequence. |