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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.18G178700.1.p |
| Common Name | GLYMA_18G178700 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 315aa MW: 36813.1 Da PI: 5.2757 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.18G178700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 44.5 | 5.1e-14 | 106 | 177 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek 72
+fY+ YA+ Fs+rks+ + ++ge+ ++tfvCskeg+r+++ + ++++++ ++ tr+gCk ++v+ ++
Glyma.18G178700.1.p 106 QFYKWYARANDFSIRKSHALIN-KKGETLQQTFVCSKEGYRQDRGLSpQNRKHEYKNFTRCGCKVYIRVHVNE 177
6****************99998.6777*****************99866777778999999999999998874 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MEEHSIRDCS NDGTFEDVHM EDDGVDLRMM SLVSKIKNMC RWNEDGLDDN ECFENNVLDD 60
NELKDEEDCD NEVLNDEGYH ETILEDGVEY VVEINDANPL MINGYQFYKW YARANDFSIR 120
KSHALINKKG ETLQQTFVCS KEGYRQDRGL SPQNRKHEYK NFTRCGCKVY IRVHVNELTD 180
RCGGHKHKLL NEQDCGLLSG HRKITATDAM QIENYRKVVI RPPHIYASLA QTSGGYNKVG 240
YVRKDIYNYF ARQGHEQSYD VIRALNYFHH LCSKDPMMDD ENRLQHLFWC DANSRMNYVV 300
FGDVLAFDET YMKK*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235915 | 1e-174 | AC235915.2 Glycine max clone GM_WBc0232C06, complete sequence. |
