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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.18G178400.1.p |
| Common Name | GLYMA_18G178400 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 358aa MW: 42121.2 Da PI: 5.2946 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.18G178400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 37.8 | 6.3e-12 | 68 | 139 | 1 | 72 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek 72
+fY+ Y + Fs++ks+ + ++ge+ ++tfvCskeg+r+++ + ++++++ ++ tr+gCk ++v+ ++
Glyma.18G178400.1.p 68 QFYKWYERANDFSIQKSHALIN-KKGETLQQTFVCSKEGYRQDRGLSpQNRKHEYKNFTRCGCKVYIRVHVNE 139
6****************99988.6777*****************99866777778999999999999998874 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MCCWNEDGLD DNECFENNVL DDNELKDEED CDNEVLNDEG YHETILEDGV EYVVEINDAN 60
RLMINGYQFY KWYERANDFS IQKSHALINK KGETLQQTFV CSKEGYRQDR GLSPQNRKHE 120
YKNFTRCGCK VYIRVHVNEL TDRCGGHKHK LLNEQDCGLL SGHRKITAID AMQIENYRKV 180
VIRPPHIYAS LAQTSWGYNK VGYVRKDIYN YFARQGHEQS SDFNRALNYF HHLCSKDPMM 240
VVAYIVDDEN RLQHLFCVNH HNNTIVFATA LVTNETEETY MWLLEQFLKE MKGKHPSFII 300
TDGDLEIVEF DEKWNDMITR FGLEDNNWVI TLYERKQTWA TTYIKGIFFA CIRTVSQ*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235915 | 1e-176 | AC235915.2 Glycine max clone GM_WBc0232C06, complete sequence. |
