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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.18G133900.1.p |
| Common Name | GLYMA_18G133900 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
FAR1 |
| Protein Properties |
Length: 140aa MW: 16521.8 Da PI: 6.7495 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.18G133900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 67.6 | 3.2e-21 | 49 | 139 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr.traetrtgCkaklkvkkek.dgkwevtkleleHnHel 89
fY YA+ GFs+rksk k+ +ge t++tf Cs++g re++ ++e+++ + tr++C+ak++v+ +k +wev++++ eHnH+l
Glyma.18G133900.1.p 49 FYYWYARINGFSLRKSKVVKN-CKGEKTQQTFLCSRQGVREDKGLTNETRKCeLINDTRCECNAKFVVHVMKnYRRWEVKEFSDEHNHKL 137
9****************9999.77889***************9988444443156789*************9899**************9 PP
FAR1 90 ap 91
p
Glyma.18G133900.1.p 138 LP 139
75 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 140 aa
Download sequence Send
to blast |
MSFMNFNYCF ALLDEDEFEE KPSGEPIIIN GLVDIGDINM SNLEATYLFY YWYARINGFS 60
LRKSKVVKNC KGEKTQQTFL CSRQGVREDK GLTNETRKCE LINDTRCECN AKFVVHVMKN 120
YRRWEVKEFS DEHNHKLLPP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC235395 | 1e-165 | AC235395.1 Glycine max strain Williams 82 clone GM_WBb0118D03, complete sequence. |
