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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Glyma.18G126800.2.p |
| Common Name | GLYMA_18G126800, LOC100804328 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 250aa MW: 28686.3 Da PI: 8.3347 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.18G126800.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 55 | 1.4e-17 | 83 | 134 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++t+eq++ L++ Fe ++++ e++ +LAk+lg++ rqV +WFqNrRa+ k
Glyma.18G126800.2.p 83 RRLTSEQVQFLQSNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFK 134
479***********************************************98 PP
|
| 2 | HD-ZIP_I/II | 122.3 | 2.4e-39 | 81 | 172 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
k rrl++eqv++L ++Fe e+kLeperKv+la+eLg+qprqva+WFqnrRAR+ktkqlE+dy +Lk++y lk++ ++L +e+++L+ee+
Glyma.18G126800.2.p 81 KTRRLTSEQVQFLQSNFEVENKLEPERKVQLAKELGMQPRQVAIWFQNRRARFKTKQLETDYGMLKASYHVLKRDYDNLLQENDKLKEEV 170
789************************************************************************************999 PP
HD-ZIP_I/II 92 ke 93
++
Glyma.18G126800.2.p 171 NS 172
75 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 250 aa
Download sequence Send
to blast |
MAGQKLHGGS SMTLLLQKER LPCSPELIQS FCFQNSEPSF QGSKSMANVV NVTHRPFFQG 60
PEKEENGNDA DFEVCLHQPG KTRRLTSEQV QFLQSNFEVE NKLEPERKVQ LAKELGMQPR 120
QVAIWFQNRR ARFKTKQLET DYGMLKASYH VLKRDYDNLL QENDKLKEEV NSLNRLIPRE 180
QEEQNSDDTS CDTVNSRHKE HKEHKDLIIN TGSENGSEVP LPVKIPPMLW NQTTQISRKM 240
KKTSSAKTS*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 128 | 136 | RRARFKTKQ |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:16055682}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription activator involved in leaf development. Binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:8535134}. |
