 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.18G091600.1.p |
| Common Name | GLYMA_18G091600, LOC100782025 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
ERF |
| Protein Properties |
Length: 213aa MW: 23205.9 Da PI: 6.2786 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.18G091600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.5 | 2.2e-20 | 26 | 76 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++y+GVr ++ +gr++AeIrdp + ++r++lg+f+taeeAa+a++ a++ l+g
Glyma.18G091600.1.p 26 PRYRGVRKRP-WGRFAAEIRDPLK---KARVWLGTFDTAEEAARAYDTAARTLRG 76
68********.**********743...5*************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MGRGGTAAAA VEIAEPGSRP VFFKEPRYRG VRKRPWGRFA AEIRDPLKKA RVWLGTFDTA 60
EEAARAYDTA ARTLRGPKAK TNFPLSPPFY HPDPFSDHRY FDGAGAGEDF QDHRRPTSSG 120
MSSTVESFSG PRAAVPAKAP VIVNRRYPRT PPVVPEDCRS DCDSSSSVVD DGDGDNVASS 180
FRREPLPFDL NVLPLDDADV ATDDLFCTVL CL*
|
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.60574 | 0.0 | cotyledon| hypocotyl| leaf| meristem| pod| root| stem |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways and could also regulate other AtERFs. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:11487705, ECO:0000269|PubMed:9756931}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by jasmonate (JA), ethylene and Alternaria brassicicola (locally and systemically). Moderate induction by wounding or drought stress does not require EIN2, whereas induction by NaCl does. Transcripts accumulate slightly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by ethylene, exogenous abscisic acid (ABA), cold and heat stress. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:12805630}. |
