PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.18G018400.1.p
Common NameGLYMA_18G018400, LOC100817300
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family EIL
Protein Properties Length: 465aa    MW: 52506.3 Da    PI: 4.6202
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.18G018400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3401.51.1e-122233511353
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          e lkkrmwkd++ll++lke++++    +e++++ak     +e+++rkkmsraQD++LkYM+k+mevcnaqGfvYgiipekgkp++g+s s
  Glyma.18G018400.1.p  23 EKLKKRMWKDRVLLQKLKEKRQK----QEPDVEAK-----QEASKRKKMSRAQDSVLKYMVKIMEVCNAQGFVYGIIPEKGKPMSGSSGS 103
                          569****************9998....78878887.....7************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          Lr+WWk++++fd+n+p+a+sky     +ls++ +l  +  s+ h l++lqD+tlgSLLsalmqhc ppqrrfple g++pPWWP+G+e w
  Glyma.18G018400.1.p 104 LRKWWKDQIRFDQNAPVAVSKYL---PLLSKDIDL--DIASYIHLLQDLQDSTLGSLLSALMQHCAPPQRRFPLEGGLSPPWWPNGEEIW 188
                          **********************4...477777777..679************************************************** PP

                          HHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXX CS
                 EIN3 181 wgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrk 269
                          wge+g l+++ g+ppy+kphdlkkawkvsvL+avikh+sp+++++r+l+ qsk lqdkm+a++s+++++v+n+ee++++      + l+ 
  Glyma.18G018400.1.p 189 WGEQGlLAQENGPPPYRKPHDLKKAWKVSVLAAVIKHISPDFDKLRRLVTQSKTLQDKMTARDSATWSKVMNHEEALLDL---TEKCLKI 275
                          *****9999999***************************************************************97742...2334444 PP

                          XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS
                 EIN3 270 qspkvtlsceqkedvegkkeskikhvqavkttagfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353
                          ++ + +l++e++e+ e ++e+  +         ++p   krk  ++  ++    +  + cq++ +++se+++ fadkn + ++e
  Glyma.18G018400.1.p 276 SNDDDNLEEEEEEEEE-EEEEGFS---GS----HEPQLLKRKGAFGFGSTDALVDKLYACQNAGCPQSEPSMEFADKNLRLDHE 351
                          6677777777665444.3333322...23....345666777677766666666668***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.6E-11224263No hitNo description
Gene3DG3DSA:1.10.3180.106.6E-66138267IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.49E-58141266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009873Biological Processethylene-activated signaling pathway
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MVLIREEEIV EEMSEAECNI DYEKLKKRMW KDRVLLQKLK EKRQKQEPDV EAKQEASKRK  60
KMSRAQDSVL KYMVKIMEVC NAQGFVYGII PEKGKPMSGS SGSLRKWWKD QIRFDQNAPV  120
AVSKYLPLLS KDIDLDIASY IHLLQDLQDS TLGSLLSALM QHCAPPQRRF PLEGGLSPPW  180
WPNGEEIWWG EQGLLAQENG PPPYRKPHDL KKAWKVSVLA AVIKHISPDF DKLRRLVTQS  240
KTLQDKMTAR DSATWSKVMN HEEALLDLTE KCLKISNDDD NLEEEEEEEE EEEEEGFSGS  300
HEPQLLKRKG AFGFGSTDAL VDKLYACQNA GCPQSEPSME FADKNLRLDH EALRAFRTVD  360
SDVLPFHRYL SNDAPPITSL DDLMNVAFQN DVNLGEAAGG SGTLEDDPCY WLNAIENLEL  420
QAALELLVRD NMDFAQNVPV QIPQGQGQED AASVWGLGTH PTQG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A7e-571392651126Protein ETHYLENE INSENSITIVE 3
4zds_B7e-571392651126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.18G018400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ9241910.0JQ924191.1 Glycine max clone Gm11lower_Williams_82 genomic sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025982436.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9FJQ51e-124EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX161e-125EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLI1MYT50.0I1MYT5_SOYBN; Uncharacterized protein
STRINGGLYMA18G02190.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-120EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]