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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.17G255100.1.p |
| Common Name | GLYMA_17G255100, LOC100807827 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
DBB |
| Protein Properties |
Length: 328aa MW: 36454.1 Da PI: 6.6145 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.17G255100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 21.4 | 5.2e-07 | 53 | 92 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
C+ ++++e++ fC+ ++ lC+ C H+ H+
Glyma.17G255100.1.p 53 QCDVCNKHEASVFCTADEAALCDGCDHRVHHAnklaskHQ 92
7**************************9964446666666 PP
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| 2 | zf-B_box | 24.7 | 4.9e-08 | 103 | 142 | 2 | 39 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39
+ + C+ ++e ++ fC++++ lC++C +++H+ Ht+
Glyma.17G255100.1.p 103 QHPLCDICQERRAFTFCQQDRAILCKECDVSIHSAneHTL 142
5689*****************************6688987 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000989 | Molecular Function | transcription factor activity, transcription factor binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MDGSFIIVVL PPLPFDHIYP SQSLPTFYEH WPTPTLPLFS LSSFKLLTPM KIQCDVCNKH 60
EASVFCTADE AALCDGCDHR VHHANKLASK HQRFSLLRPS PKQHPLCDIC QERRAFTFCQ 120
QDRAILCKEC DVSIHSANEH TLKHDRFLLT GVKLSASAML RSSETTSDSN SNPSLLNFSH 180
QTTLLPPSST TTTTTSNNNN NKVAVEGTGS TSASSISEYL IETLPGWQVE DFLDSYSVPF 240
GFCKNDEVLP RFDGEMEGHL SSFSTENMGI WVPQAPPTLM CSSQMDRVIV HGETNIKGSS 300
RSRLKDDNFT VPQISPPSNS KRARFLW*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that acts as positive regulator of seedling photomorphogenesis (PubMed:17965270). Acts downstream of COP1 and play an important role in early and long-term adjustment of the shade avoidance syndrome (SAS) responses in natural environments (PubMed:21070414). {ECO:0000269|PubMed:17965270, ECO:0000269|PubMed:21070414}. |
| Publications
? help Back to Top |
- Xu D, et al.
BBX21, an Arabidopsis B-box protein, directly activates HY5 and is targeted by COP1 for 26S proteasome-mediated degradation.
Proc. Natl. Acad. Sci. U.S.A., 2016. 113(27): p. 7655-60
[PMID:27325768] - Xu DB, et al.
The G-Protein β Subunit AGB1 Promotes Hypocotyl Elongation through Inhibiting Transcription Activation Function of BBX21 in Arabidopsis.
Mol Plant, 2017. 10(9): p. 1206-1223
[PMID:28827171] - Xu D,Jiang Y,Li J,Holm M,Deng XW
The B-Box Domain Protein BBX21 Promotes Photomorphogenesis.
Plant Physiol., 2018. 176(3): p. 2365-2375
[PMID:29259103] - Job N,Yadukrishnan P,Bursch K,Datta S,Johansson H
Two B-Box Proteins Regulate Photomorphogenesis by Oppositely Modulating HY5 through their Diverse C-Terminal Domains.
Plant Physiol., 2018. 176(4): p. 2963-2976
[PMID:29439209] - Crocco CD,Ocampo GG,Ploschuk EL,Mantese A,Botto JF
Heterologous Expression of AtBBX21 Enhances the Rate of Photosynthesis and Alleviates Photoinhibition in Solanumtuberosum.
Plant Physiol., 2018. 177(1): p. 369-380
[PMID:29555784] - Kang X, et al.
HRB2 and BBX21 interaction modulates Arabidopsis ABI5 locus and stomatal aperture.
Plant Cell Environ., 2018. 41(8): p. 1912-1925
[PMID:29748960]
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