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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.17G255000.1.p |
| Common Name | GLYMA_17G255000, LOC100807290 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
SRS |
| Protein Properties |
Length: 327aa MW: 35594.1 Da PI: 7.2575 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.17G255000.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 223 | 5.8e-69 | 111 | 262 | 4 | 153 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa...aeaaskrkrel.kskkqsalsst 89
g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqql+a+++++++++ + ++skr+re+ + +++ +l++
Glyma.17G255000.1.p 111 GGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQHQQQNQQpqfRGDHSKRHRENiEGAAAGSLACV 200
789****************************************************99999888888888999999998233444555555 PP
DUF702 90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
++ + ++ le ++P+e++s+avfrcv+vs++d +e +aYqtav+igGhvfkGiLydqG++
Glyma.17G255000.1.p 201 PVPIT--TTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGTD 262
55555..5679999************************************************87 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MAGFFSLGRQ NKAEEQEEDQ REDNCQFLFR NNVNEEIYNK GFEIWPQSSY HHHHQNLTNF 60
YSFGVGPSRR NNNNSSSNNN VNDEVSVSFS DESNRFGFTV MRSGGGGVGG GGMNCQDCGN 120
QAKKDCQHLR CRTCCKSRGF QCQTHVKSTW VPAAKRRERQ QQLSALQHQQ QNQQPQFRGD 180
HSKRHRENIE GAAAGSLACV PVPITTTGLE LGQFPPELNS PAVFRCVKVS AMDAPDERYA 240
YQTAVNIGGH VFKGILYDQG TDGPYAGAGC EGSSGGGGEA QPLSLMAAAT TTTAATTSGN 300
PFEASLYTAP MNAYMAGTHF FPPPRS*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: In young plants, detected at a low level only in the root tips and lateral root primordia. In fully open flowers, primarily observed in the filaments and anthers. {ECO:0000269|PubMed:20706774}. |
| Uniprot | TISSUE SPECIFICITY: Mainly expressed in the filaments of flowers, the shoot apex regions and pollen. Also present in leaves. {ECO:0000269|PubMed:20706774}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Regulates anther dehiscence and floral development. {ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:20706774}. |
