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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.17G245200.1.p |
Common Name | GLYMA_17G245200, LOC100802503 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 248aa MW: 27737.2 Da PI: 10.441 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G245200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 74 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+g+W++ Ed +l +v+ +G+++W++I+r++ gR++k+c++rw +
Glyma.17G245200.1.p 74 KGPWSAKEDRILTGLVEAHGPRNWASISRHIK-GRSGKSCRLRWCNQ 119
79*****************************9.***********985 PP
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2 | Myb_DNA-binding | 51.9 | 1.8e-16 | 128 | 168 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
+++t Ede +++a++++G++ W+tIar+++ gRt++ +k++w+
Glyma.17G245200.1.p 128 PFSTREDEVILHAHARFGNK-WATIARMLP-GRTDNAVKNHWN 168
79******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MNLTHFPLHI YNFPDNHHSS KCHTLKHKQT PKKEKMKAMK RCSSSSSSSY SSASESTPQS 60 NQNKNSNNFC YKIKGPWSAK EDRILTGLVE AHGPRNWASI SRHIKGRSGK SCRLRWCNQL 120 SPTVEHRPFS TREDEVILHA HARFGNKWAT IARMLPGRTD NAVKNHWNAT LKRRRFGADV 180 VVEDDPLTAL TLAPPGSGCC GRGEERRGVS PAGFWDAMRD VVAREVRGYV SSSFSDNLAS 240 NEGLSKY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gv2_A | 2e-38 | 73 | 174 | 3 | 104 | MYB PROTO-ONCOGENE PROTEIN |
1h88_C | 9e-38 | 73 | 174 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 9e-38 | 73 | 174 | 57 | 158 | MYB PROTO-ONCOGENE PROTEIN |
1mse_C | 3e-38 | 73 | 174 | 3 | 104 | C-Myb DNA-Binding Domain |
1msf_C | 3e-38 | 73 | 174 | 3 | 104 | C-Myb DNA-Binding Domain |
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