 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.17G240700.1.p |
| Common Name | GLYMA_17G240700 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
NAC |
| Protein Properties |
Length: 286aa MW: 32141.5 Da PI: 7.842 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.17G240700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 88.9 | 9.1e-28 | 9 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k......kvkaeekewyfFskrdkkyatgkrknratksg 81
lppG+rF P++e lv +yL+kk e+++ + ++ i+e+d+y+++P +Lp + + + ++ ++F+ +++ t++r++r++ksg
Glyma.17G240700.1.p 9 LPPGYRFYPSEEVLVGYYLTKKNENREegFYGSDLIRELDLYDHDPFELPdAaacfsyGY--KGRKKHWFCYAKE---TKRRNRRKVKSG 93
79*********************999966566688**************95367764433..4445555555544...34588999**** PP
NAM 82 yWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdWvmheyrl 128
+W +gk +++ ++ ++ + g+++ +vfy g + +++ +tdW++ ey+l
Glyma.17G240700.1.p 94 FWLRKGKVRDISDHngDDVVLGTRTRFVFYVGnSLKNAARTDWILYEYAL 143
************995555669*********874668889*********87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MEDHAHAALP PGYRFYPSEE VLVGYYLTKK NENREEGFYG SDLIRELDLY DHDPFELPDA 60
AACFSYGYKG RKKHWFCYAK ETKRRNRRKV KSGFWLRKGK VRDISDHNGD DVVLGTRTRF 120
VFYVGNSLKN AARTDWILYE YALVDRFLAS FVLCRVVNKP PHKNSPSEIG LSCCAEESVV 180
AVVRHVGVQC DGCAESDVVE AKVCDEGFVN RENEIAENPI SGEHGDPAAP VSVAQGSQPL 240
SIANFCISNC LKNLFRIRVI NTGNQSKCLL FRKGFLNFPV AVHCS*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 3e-17 | 5 | 159 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 3e-17 | 5 | 159 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 3e-17 | 5 | 159 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 3e-17 | 5 | 159 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 3e-17 | 5 | 159 | 16 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 3e-17 | 5 | 159 | 13 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 3e-17 | 5 | 159 | 13 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.268 | 0.0 | hypocotyl| meristem| root| seed coat| somatic embryo |
