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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.17G230000.2.p |
Common Name | GLYMA_17G230000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TALE |
Protein Properties |
Length: 548aa MW: 60711.3 Da PI: 6.3775 |
Description |
TALE family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G230000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 26.1 | 1.5e-08 | 466 | 504 | 18 | 54 |
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
+F++ ++yp+ +e+ LA k gLt +qV++WF N R +
Glyma.17G230000.2.p 466 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 504
5887779******************************88 PP
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2 | BELL | 62.7 | 7.9e-21 | 340 | 405 | 4 | 70 |
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70
+ ++ k++Ll ll+ Vd+ Y+q+ ++++tv+s+F+a+++l++ ++++++Al++iS ++ L+++i++
Glyma.17G230000.2.p 340 ATESNKSQLLMLLQLVDNGYSQCLDEIHTVVSAFHAATELDP-HMHAHFALQTISLLYKDLRERISN 405
56889*************************************.**********************87 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 548 aa
Download sequence Send
to blast |
MENNMYSARL DMAGRNSTGI DEIARHLAPK PLIHCYSFDL NNQNHIINGI PVLAGEQGEP 60 ANDVHVEGDA SNQINNNDFQ EHLVGGRPIA SASLSAARIG LQANLESSEA LPYSMCSLEA 120 LGPYLFNNWQ GTSNPLPATF GDHHHAYDEL SSIGKWNVNK ILRAPEADGT EILAYSSIGS 180 LVQNGWTSSN VANLANFAYN SPHCSNELSL SLARSPQTTG QCSEMSCSGA SHSMNGTRSG 240 LEQSSCSSKE LCMRLGSNKH VQFSSAILGS RFLVGIQEIL AQIATYSFEN VEQINCSAAG 300 VRAGGDKSAS AFTPKRTVEN NQNASMFGAH VEESPLEGLA TESNKSQLLM LLQLVDNGYS 360 QCLDEIHTVV SAFHAATELD PHMHAHFALQ TISLLYKDLR ERISNCILAM GPDFNSLCSE 420 EEKEWSLETS FIQKQWALQQ LKRKDQLWRP QRGLPERSVS VLRTWMFQNF LHPYPKDAEK 480 HLLAVKSGLT RSQVSNWFIN ARVRLWKPMI EEMYAEMSRR KACRNEEGME ITQRTRISMK 540 NQMLNIN*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Down-regulated in the shoot apical meristem (SAM) upon floral induction. {ECO:0000269|PubMed:17908157}. |
Uniprot | TISSUE SPECIFICITY: Most abundant in flowers. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor which may be involved in the signal transduction pathway downstream of the COP1 gene. Controls floral competency as a specific activator of FLC expression. Is responsive of the nuclear import of SHOOT MERISTEMLESS (STM). {ECO:0000269|PubMed:17908157}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By light. In etiolated seedlings, maximally expressed after 3 days of illumination. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |