 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.17G143900.1.p |
Common Name | GLYMA_17G143900, LOC100812293 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
ERF |
Protein Properties |
Length: 233aa MW: 25378.1 Da PI: 5.9007 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G143900.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 61 | 110 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f t+++Aa+a++ a++ ++g
Glyma.17G143900.1.p 61 TYRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFPTPDMAARAHDVAALTIKG 110
69****998.**********843...6**********************99876 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MVMEESNPLD NEVQPTTSSS SFTITTPSTS SSSSIEEATN TTTKEKKKKR AISNIEGKHP 60 TYRGVRMRQW GKWVSEIREP RKKSRIWLGT FPTPDMAARA HDVAALTIKG SSAYLNFPEL 120 AAKLPRPAST SPKDIQAAAA KASALDFGHQ SHEAESELSQ AVSSSIQTQS SSSSSNSSLK 180 GVDDTFLDLP DLSLDLSHGA DEFHYSSAWL VAGAEHIELG FRLEEPFLWE SY*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EF551166 | 0.0 | EF551166.1 Glycine max dehydration-responsive element binding protein 6 mRNA, complete cds. |