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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.17G076900.2.p |
Common Name | GLYMA_17G076900, LOC102666705 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
C2H2 |
Protein Properties |
Length: 581aa MW: 64063.6 Da PI: 7.6048 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G076900.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 11.8 | 0.00073 | 491 | 513 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++Cp+C k+F++ L H r+H
Glyma.17G076900.2.p 491 HECPICFKVFPSGQALGGHKRSH 513
79******************999 PP
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Protein Features
? help Back to Top |
 |
Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
SuperFamily | SSF57667 | 8.06E-6 | 13 | 35 | No hit | No description |
SMART | SM00355 | 0.38 | 13 | 35 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.785 | 13 | 35 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 0.0061 | 13 | 35 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 15 | 35 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 8.06E-6 | 95 | 122 | No hit | No description |
SMART | SM00355 | 0.097 | 100 | 122 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 10.242 | 100 | 127 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 4.1E-6 | 102 | 124 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 102 | 122 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.868 | 401 | 428 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 3.44E-6 | 401 | 423 | No hit | No description |
SMART | SM00355 | 0.14 | 401 | 423 | IPR015880 | Zinc finger, C2H2-like |
Pfam | PF13912 | 5.9E-11 | 401 | 425 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 403 | 423 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 3.44E-6 | 486 | 513 | No hit | No description |
Pfam | PF13912 | 4.0E-12 | 490 | 514 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.074 | 491 | 513 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 8.974 | 491 | 513 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 493 | 513 | IPR007087 | Zinc finger, C2H2 |
Sequence ? help Back to Top |
Protein Sequence Length: 581 aa
Download sequence Send
to blast |
MEGDHHRIQE LKHACKFCGK CFPCGRSLGG HMRSHITNLS SEMMNEKKEK LSSSLNNGGD 60 KDSEAAAATN AAASYGLREN PKKTWRISDY SSEDPLVFDK FCKECGKGFH SWKALFGHMK 120 CHSEKERVSN SLEDQDSWTN SAKMVMDSQS DNEATAPNKR RRSKRRTRYT VVASSAAAAT 180 TSSVVSFANP SSSSLSEVEQ EQEEVAMSLM MLSRDVSPWS GRHSVAESSD NNSAYFEARS 240 SVRTNLVTKF DCSNKNFPPK TAKVTKQSDN KWEVGNSENP NSIRGTSSQL LTTIAASDNI 300 TTEIPENGFR VNKSRVSNKG YERAKSELEY VSALEDSEGE HGRSRVNGTE SVLSKSVTTT 360 GNKYSSIKTK FSGSEMKSNK NLVDKASEAE SSKNSNKRGK FECTTCNKIF HSYQALGGHR 420 ASHKKIKGCF ASTNESSENS IETDPSPDPI ATENKLMKNS DSEYLVEHQH GASLHNEGET 480 VNESKKSKGH HECPICFKVF PSGQALGGHK RSHMVGGSES RNFQTIVPQE PVAEIRDFLD 540 LNLPASTEEE SYSHADSNSN RPWWIVEDNH KQEALVGLIS *
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 157 | 164 | NKRRRSKR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC967125 | 0.0 | KC967125.1 Glycine max C2H2-type zinc finger protein 4 (ZFP4) mRNA, complete cds. |