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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.17G059400.1.p |
Common Name | GLYMA_17G059400, LOC100817639 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
HB-PHD |
Protein Properties |
Length: 704aa MW: 79773.4 Da PI: 9.8079 |
Description |
HB-PHD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G059400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 33.2 | 9.1e-11 | 487 | 531 | 9 | 53 |
HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53
++ +e L ++F++n p ++ re L+k+lgL++++V+ WF+N R+
Glyma.17G059400.1.p 487 HDAVEKLRQVFAENELPPRSIREGLSKELGLDTEKVSKWFKNARY 531
67899**************************************97 PP
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2 | PHD | 38 | 3.9e-13 | 224 | 279 | 1 | 51 |
SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
PHD 1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51
+C C + +++++lC+ +Ck++fH+kCl+++l++e++p g w+C+ C++k
Glyma.17G059400.1.p 224 FCVKCTVreELPDNDIILCNgTCKRAFHQKCLDPPLDTENIPPGeqGWFCKFCECK 279
588888844445*******956********************9999*******985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 704 aa
Download sequence Send
to blast |
MRDSEKKLNK KGSKKSSPLK VRKKGQGKKE KVKVGSKSHT KNAGTDISRK RVISSLKVKG 60 PPKDSSDKKL IIGKKLPIKN KKSSLKPSSK LQGKKASLSS RKEGGDADGA VKLPKMKRKR 120 KKKRQRNNVD LDDPSRLQRR TRYLLIKMKL EQNLIDAYSG EGWKGQSREK IKPEKELQRA 180 RKQILKCRLG IRDVIRQLDS LGSLSSIEDS AIAPDGSVYH EHIFCVKCTV REELPDNDII 240 LCNGTCKRAF HQKCLDPPLD TENIPPGEQG WFCKFCECKM EILEATNAHL GTHFSLHSTW 300 QDVFKEEAAI PDGETALLNP EEEWPSDDSE DDDYDPERKE DSHNINTEGA NDSASEDLTS 360 STSLCSSDGE SSPVDGVSHE YFSVKSSIDS DESEDKACGC RQRKAVDYKK LYDEMFGKDA 420 PAYEQLSEDE DWGPGKRKRR EKESDAVDSL MTLHESENMH PNNEHLDMTR KNSSSIKIKR 480 HCFRIPHDAV EKLRQVFAEN ELPPRSIREG LSKELGLDTE KVSKWFKNAR YLALKNRKYQ 540 AEGGADQLQS ITSTKNSRLQ NQEIFDLLKS KTSKITMTHF QKDVKNVNGR KKTKSSNKKR 600 QPEIPPPPGE NGNMDFMEIS DDVSLKKLLK KRKKRLISFT FEGDSQAAEL EFERLSKLKT 660 KVDSMKQKLT AIQNSRVKDS NEPHSSEPSI VYVPTAVLRE KVE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 115 | 122 | MKRKRKKK |
2 | 117 | 123 | RKRKKKR |
3 | 120 | 125 | KKKRQR |
4 | 436 | 441 | RKRREK |
5 | 624 | 632 | LKKLLKKRK |
6 | 626 | 632 | KLLKKRK |
7 | 628 | 635 | LKKRKKRL |
8 | 629 | 633 | KKRKK |
Functional Description ? help
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Source |
Description |
UniProt | Specifically binds to the fungal elicitor-responsive DNA element, 5'-CTAATTGTTTA-3', of the gene PR2 promoter. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By pathogen infection. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-160 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |