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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.17G047300.1.p |
Common Name | GLYMA_17G047300, LOC732656 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
ERF |
Protein Properties |
Length: 199aa MW: 21809 Da PI: 4.6568 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.17G047300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.7 | 3.4e-19 | 18 | 66 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
ykGVr +k +g+Wv+eIr p++ r+r++lg+++t+e+Aa+a +aa+ +l+g
Glyma.17G047300.1.p 18 YKGVRKRK-WGKWVSEIRLPNS---RQRIWLGSYDTPEKAARAFDAAMFCLRG 66
9****999.**********933...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MAKPSSEKPE EHSDSKYYKG VRKRKWGKWV SEIRLPNSRQ RIWLGSYDTP EKAARAFDAA 60 MFCLRGRNAK FNFPDNPPDI AGGTSMTPSQ IQIAAAQFAN AGPHEGHSGR PEHPPMESPS 120 PSVSEGTIQT DSDVPTLNGS VTDLFTPVGS SGYASDYGIF PGFDDFSGDF YVPEMPNVNY 180 GEENGEGFIV DESFLWNF*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.26848 | 0.0 | cotyledon| flower| hypocotyl| leaf| root| seed coat |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | DQ208969 | 0.0 | DQ208969.1 Glycine max dehydration-responsive element binding protein 3 mRNA, complete cds. |
Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] - Chen M, et al.
Cold-induced modulation and functional analyses of the DRE-binding transcription factor gene, GmDREB3, in soybean (Glycine max L.). J. Exp. Bot., 2009. 60(1): p. 121-35 [PMID:18988621] - Li SJ, et al.
The Citrus transcription factor, CitERF13, regulates citric acid accumulation via a protein-protein interaction with the vacuolar proton pump, CitVHA-c4. Sci Rep, 2016. 6: p. 20151 [PMID:26837571] - Yin XR, et al.
Involvement of an ethylene response factor in chlorophyll degradation during citrus fruit degreening. Plant J., 2016. 86(5): p. 403-12 [PMID:27037684]
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