PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.17G023200.1.p
Common NameGLYMA_17G023200
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 193aa    MW: 21247.8 Da    PI: 10.0871
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.17G023200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH231.4e-074689855
                         HHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  8 rErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                         +Er RR+++ + f +L++ +P  +     +  +   i  ++++YIk+L+
  Glyma.17G023200.1.p 46 VERERRSKMTQMFTQLQTTVPGvL-----PQATREVIINETIKYIKELE 89
                         7*********************88.....678899***********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.4483888IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.00154494IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.93E-1145112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-1146104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.03E-54689No hitNo description
PfamPF000103.7E-54689IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MAPLSQIPPS SSLHPSNIAE TGNIYTTTSR KRVKKMDHTN CESLNVERER RSKMTQMFTQ  60
LQTTVPGVLP QATREVIINE TIKYIKELEM KMQKLEELKE SMKEGSILLA CGNNNMNCSV  120
TVSVSANVAF FGIQSLPRSG LVSVIMKVFC KHRAEILAAN VSVNNGKLIL AITAMVQNGG  180
VVENIRRQIL SL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.17G023200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006600339.11e-139uncharacterized protein LOC102663211
RefseqXP_028208646.11e-139uncharacterized protein LOC114391851
TrEMBLA0A445G0R71e-137A0A445G0R7_GLYSO; Uncharacterized protein
TrEMBLK7MJK21e-137K7MJK2_SOYBN; Uncharacterized protein
STRINGGLYMA17G02615.11e-138(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143301314
Representative plantOGRP1384734
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.16e-08bHLH family protein