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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G167600.1.p |
Common Name | GLYMA_16G167600, LOC100804788 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 656aa MW: 72704.9 Da PI: 4.9561 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G167600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 92.3 | 5e-29 | 63 | 146 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW+kqe+laL+++r++m+ ++r+++ k+plWeevs+k++e g++r++k+Ckek+en+ k++k++keg++++++++ t+++fdql+
Glyma.16G167600.1.p 63 RWPKQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYNRNAKKCKEKFENVYKYHKRTKEGRSGKSEGK--TYRFFDQLQ 146
8********************************************************************975544..6******98 PP
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2 | trihelix | 104.7 | 6.6e-33 | 472 | 557 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r+++e++++++ k+plWee+s+ mr+ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+qlea
Glyma.16G167600.1.p 472 RWPKVEVQALINLRTSLETKYQESGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLEA 557
8*********************************************************************8.99***********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 656 aa
Download sequence Send
to blast |
MLGDSAVLGT GGGGSGDAVA APPPAASGGA HDGGVDGGDG GGGGSNSGDD RVEEGERSFG 60 GNRWPKQETL ALLKIRSDMD VAFRDASVKG PLWEEVSRKL AELGYNRNAK KCKEKFENVY 120 KYHKRTKEGR SGKSEGKTYR FFDQLQALEN NPAIHGKQSP TPPKPPPQTT ALSATPVSIV 180 VTTTTTTPSS IIMPLPLPPV SNNNNNTTVP STTSLPMPQS ILNITPPSTL NITIPSFPPS 240 NPTTYFPTQT PNPTSNNNNN PPSTITPPSF PNFPADLLSN SSSSSTSSEE TPTTEARGRK 300 RKRKWKDFFE RLMKEVIEKQ EELQRRFLEA IEKREQERVV REEAWRMQEM QRINREREIL 360 AQERSIAAAK DAAVMTFLQK IAEHQQQETI NLEPALNNNS ITVVPQQPVP QATPTSTPTP 420 QQAQTTTVPE APQVQPLVPQ LQQQQQIVVS NVEINKADNN GENLMMEASS SRWPKVEVQA 480 LINLRTSLET KYQESGPKGP LWEEISALMR KMGYNRNAKR CKEKWENINK YFKKVKESNK 540 KRPEDSKTCP YFHQLEALYR EKNKGEGQMK PESMMAPLMV QPEQQWPPQT TLVVPPEVTM 600 GDTQNDPMDR QYHEENEDDE DDKEIGDEDE DEDDEGGDNY EIVASKPATA DASGE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |