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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G167500.1.p |
Common Name | GLYMA_16G167500, LOC100776819 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 617aa MW: 69480 Da PI: 6.2351 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G167500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 92 | 6e-29 | 77 | 160 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++qe+laL+++r++m++ +r+++lk+plWeevs+k++e g++rs+k+Ckek+en+ k+ k++k++++++ + +t+++fdql+
Glyma.16G167500.1.p 77 RWPRQETLALLKIRSDMDTVFRDSSLKGPLWEEVSRKLAELGYQRSAKKCKEKFENVYKYNKRTKDNKSGK--SHGKTYKFFDQLQ 160
8*****************************************************************99996..55567******98 PP
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2 | trihelix | 102.8 | 2.6e-32 | 436 | 521 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r+++e++++++ k+plWe++s++m++ g++rs+k+Ckekwen+nk++k+++e++k+r e+s+tcpyf++lea
Glyma.16G167500.1.p 436 RWPKAEVHALIRIRTSLETKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKRVRESSKER-REDSKTCPYFHELEA 521
8*********************************************************************8.78999********85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 617 aa
Download sequence Send
to blast |
MQLGDSSVLE ISSHTQPEMA VTAVVSPPEE VAHDGSDNSG DGGSGDGGGG EMIGMDLDAN 60 SGEGNEGNNK MSFGGNRWPR QETLALLKIR SDMDTVFRDS SLKGPLWEEV SRKLAELGYQ 120 RSAKKCKEKF ENVYKYNKRT KDNKSGKSHG KTYKFFDQLQ ALENQFTTVS YPPKPQPTST 180 LATTNPLTLP TRPSDHGNKV ISYVTTFPST NPTLISPSPQ TNTTTTTTTT TSTTNPRDSS 240 RPQTNNNNNS VTHSLPNMNT SFSTTTASTS SSTASDEDLE ERYRRKRKWK DYFRRLTRKV 300 LLKQEEMQKK FLEAMDQRER ERVAQQDNWR MQEMARINRE HEILVQERST AAAKDATVIA 360 LLQKMYGQQN PTPQVEVEPP PQQKQTIPQS QPPILMPNNN FEVKKINNGH SVTSTTTGTV 420 ATATTTTSPV NSSSSRWPKA EVHALIRIRT SLETKYQENG PKAPLWEDIS IAMQRLGYNR 480 SAKRCKEKWE NINKYFKRVR ESSKERREDS KTCPYFHELE ALYKEKSKSS KNPFGIFQNM 540 KPNEMMLMMT EPLMVQPEQQ WRPPPQSLEE GVGMENASEE YHENEENGGD DDDNIEEDGD 600 SVEDEGANPC EIATNN*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |