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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G155300.1.p |
Common Name | GLYMA_16G155300, LOC100783228 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GATA |
Protein Properties |
Length: 334aa MW: 35901.2 Da PI: 5.693 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G155300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 54.2 | 1.9e-17 | 239 | 272 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C tkTp+WR gp g+ktLCnaCG++y++ +
Glyma.16G155300.1.p 239 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 272
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MIGNFIDDID CGNFFDHIDD LLEFPDDAAA ADTSAAAPVP PPANFWSAES DSLPATDTVF 60 SDNSVTDLSA ELSVPYEDIM QLEWLSNFVE DSFSGGSMTM KKEEPQCTTT KEDIAPAQFQ 120 TASPVSVLES SSFCSGEKAG TEINISVPCG RARSKRPRPA TFNPNPVMQL ISPASSTGEN 180 TQHNAANTSK ASSDSENFAE SVIKAPKQAS GEHKKKKKIK VTFPSGQERN APSQAIRKCL 240 HCEITKTPQW RAGPMGPKTL CNACGVRYKS GRLFPEYRPA ASPTFCAAMH SNSHKKVLEM 300 RNKTGTKSGF ATVSAASPEL IPNTNSSLTL EYM*
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