PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.16G101400.1.p
Common NameGLYMA_16G101400
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family ZF-HD
Protein Properties Length: 118aa    MW: 13421.9 Da    PI: 5.7815
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.16G101400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer41.24e-132441659
          ZF-HD_dimer 16 slGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                         s Ggha   C+Ef+++  e+ t +++ C AC+ HRnFH +e ++
  Glyma.16G101400.1.p  2 SFGGHAANDCCEFLAA-REDDTLETVICVACNYHRNFHCKEIDD 44
                         68*************9.55569******************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5152314.625141IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257742.0E-7248IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.8E-11242IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MSFGGHAAND CCEFLAARED DTLETVICVA CNYHRNFHCK EIDDEITSIH HRHNPLVLLA  60
IASDGSLSHE EELAWSSQRV VQPTTSYTSL FSENDKQTKF CRTNRNRNHY LLIFECC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.16G101400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027332707.11e-20zinc-finger homeodomain protein 2-like
TrEMBLA0A0R0FW913e-82A0A0R0FW91_SOYBN; Uncharacterized protein
STRINGGLYMA14G35770.17e-20(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9116237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.24e-12homeobox protein 31