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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.16G093600.1.p |
| Common Name | GLYMA_16G093600, LOC100810821 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
Trihelix |
| Protein Properties |
Length: 267aa MW: 30957.1 Da PI: 7.2392 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G093600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 52 | 1.9e-16 | 19 | 109 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84
Wt+qe+ +Li+a++e++ +l+rg l+ ++Weev+ ++ +s+ qC++k+e+l++r++++k+++ ++ + ++y +
Glyma.16G093600.1.p 19 WTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVaarcgydL-AHPAKSALQCRHKMEKLRQRHRAEKKQQHTAAALRPGAWQYNTL 107
*************************************86666522.23368**********************99988888888887766 PP
trihelix 85 le 86
++
Glyma.16G093600.1.p 108 MD 109
65 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 267 aa
Download sequence Send
to blast |
MATPPNDAAS TKKPQPIPWT HQETVHLIRA YQEKWYALKR GPLRHNQWEE VAVVVAARCG 60
YDLAHPAKSA LQCRHKMEKL RQRHRAEKKQ QHTAAALRPG AWQYNTLMDD LERGPLPISA 120
LAPLDTFEEE DENNDDTIDD RNDYDGDGSF INIKSKSINC ILSERPVRMR SNKRGFLREH 180
VVVKEEEENE NEDDDVLGLS TEMRAFAERF IGMESLKMEM MKETERCRLE MEKKRIQMIL 240
ETQRRIVDSI GRAFGSNKRI KITQQN*
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