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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.16G053000.1.p |
| Common Name | GLYMA_16G053000 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 687aa MW: 76146.5 Da PI: 6.0778 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G053000.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 436.3 | 2.2e-133 | 324 | 685 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
lv+lLl+cAeav++++ la+++L +l+ ++p gd+mqR+aa+ft L+ rl++ + + + p+++ +++ns e+l+++++ ++++P+
Glyma.16G053000.1.p 324 LVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSVRLNS-TLTPKPTTPSKPLTPSNSLEVLKIYQIVYQACPY 412
68****************************************************9.44444566888899999***************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
+kf+h+taNqaI ea+e+eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+ s ++++etg+ L+++A++l++pfef++
Glyma.16G053000.1.p 413 VKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGP----SIDTVRETGRCLTELAHSLRIPFEFHA 498
***********************************************************....9************************** PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
v ++ledl++++L+ + gEalaVn v +lhr++ ++ ++L ++++ P +v++veqea+hn++ Fl rfleal+yysa+fds
Glyma.16G053000.1.p 499 -VGEQLEDLKPHMLNRRVGEALAVNAVNRLHRVP------GNHLGNLLTMLRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDS 581
.7*******************************9......444557******************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
l+a++p+es +r+kvE+ ++++ei+n+vaceg er+erhe+lekWr+++e GFk v ls +a++q k ll ++ +gyr+ e++g+l+l
Glyma.16G053000.1.p 582 LDATFPAESAQRAKVEQYIFAPEIRNIVACEGPERFERHERLEKWRKMMEGKGFKGVVLSPNAVTQSKILLGLYSCEGYRLTEDKGCLLL 671
****************************************************************************************** PP
GRAS 361 gWkdrpLvsvSaWr 374
gW+dr++v++SaWr
Glyma.16G053000.1.p 672 GWQDRAIVAASAWR 685
*************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 687 aa
Download sequence Send
to blast |
MNSLCGSSVS LKSENNNSRT KVQQPTTPSN DSVMQSKKNN ATQSSGDLDQ TSLTPPSLNL 60
PSLKFDLDGD VEVQSPDSSM WESFFADHNL DGDFMISSPV RTPQASSYNC NYNYAQGMQG 120
QSLSGCSPPR FSSSQIGAFN SNKGKGLSPL HRVFNSPNNQ YMQHVENLSL PAIEFLEDYQ 180
LGYSSSTTNK MCCSDHNNIA SSSECFDLSM SHQIPSSMLD GLALHNSSSR YHRGSVVVDE 240
ESSVHGGGAG GFSQLSEESD IYHQMGSMAS ASLSQALQQE HYQEKQQAQQ LQQQQQQQQQ 300
HQQENLMVPI PIGVEQEQDS GLQLVHLLLA CAEAVAKEEY MLARRYLHHL NRVVTPLGDS 360
MQRVAACFTD SLSVRLNSTL TPKPTTPSKP LTPSNSLEVL KIYQIVYQAC PYVKFAHFTA 420
NQAIFEAFET EERVHVIDLD ILQGYQWPAF MQALAARPAG APFLRITGVG PSIDTVRETG 480
RCLTELAHSL RIPFEFHAVG EQLEDLKPHM LNRRVGEALA VNAVNRLHRV PGNHLGNLLT 540
MLRDQAPSIV TLVEQEASHN GPYFLGRFLE ALHYYSAIFD SLDATFPAES AQRAKVEQYI 600
FAPEIRNIVA CEGPERFERH ERLEKWRKMM EGKGFKGVVL SPNAVTQSKI LLGLYSCEGY 660
RLTEDKGCLL LGWQDRAIVA ASAWRC*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that functions in mycorrhizal specific signaling (PubMed:23122845). Required for Myc factor signaling from mycorrhizal fungi, but has no function in Nod factor signaling from rhizobial bacteria (PubMed:23122845). Regulates the expression of RAM2, a glycerol-3-phosphate acyl transferase that promotes cutin biosynthesis to enhance mycorrhizal hyphopodia formation (PubMed:23122845). {ECO:0000269|PubMed:23122845}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced in roots during colonization by arbuscular mycorrhizal fungi. {ECO:0000269|PubMed:23122845}. |
