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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G017700.1.p |
Common Name | GLYMA_16G017700, LOC100783582 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 399aa MW: 44924 Da PI: 6.2446 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G017700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 41.8 | 1.9e-13 | 184 | 235 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+
Glyma.16G017700.1.p 184 QRMTHIAVERNRRRQMNDHLSVLRSLMPPS---YIQRGDQASIIGGAIDFVKELE 235
79****************************...9******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 399 aa
Download sequence Send
to blast |
MERLQGPLNS CFFGDPLGVN CLDHVLVDEE SLRLEEEEHL LISSLEDNMP FLQMLQSVES 60 PQFFPLKETN FQTLLRLQHK KNPWEGIAYF PRMEAQQVQA ALELESCVTH DMSEMQYSPV 120 KSESNELQHP LSVSCFEKKV NYECNQEPQK VSQTCPKSQP TATKERRKRK RTRPSKNKED 180 VENQRMTHIA VERNRRRQMN DHLSVLRSLM PPSYIQRGDQ ASIIGGAIDF VKELEQLLQS 240 LEAQKRTRKN EEGGGGGGSS SSSSSTMLCK PPPPPLLLLS SPHGYGMRSS PSDEVNCGDE 300 VKAENKSEAA DIKVTLIQTH VNLKIECQRK PGQLLKVIVA LEDLRLTILH LNITSSETSV 360 LYSLNLKIEE DCKLCSASDI AETVHQIFSF INGVARDH*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 165 | 170 | RRKRKR |
2 | 184 | 195 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235293 | 0.0 | AC235293.1 Glycine max strain Williams 82 clone GM_WBb0059D15, complete sequence. |