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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.16G016700.1.p |
| Common Name | GLYMA_16G016700, LOC100780890 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 401aa MW: 45291.2 Da PI: 4.3466 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G016700.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 125.7 | 3.8e-39 | 6 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86
+G+ F+Pt++elv++yLk+k+ g++ ++ +vi+ +d+++vePw+ p +++ ++ +w+fFs+ d ky ++kr nr+tk g+Wkat
Glyma.16G016700.1.p 6 VGLGFRPTEQELVNFYLKHKLLGDDPRV-HVIPVIDLCDVEPWNVPVilasssAIRFGDPDWFFFSPVDFKYLKSKRFNRTTKCGFWKAT 94
6999*********************999.99***************64666655555889****************************** PP
NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
gkd+++ + +++++g+kktLv+y+gr + g+k++Wv+hey++
Glyma.16G016700.1.p 95 GKDRDIRTGdtDNTVIGTKKTLVYYQGRVSCGVKSNWVIHEYHA 138
*******98667778***************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 401 aa
Download sequence Send
to blast |
MDDDIVGLGF RPTEQELVNF YLKHKLLGDD PRVHVIPVID LCDVEPWNVP VILASSSAIR 60
FGDPDWFFFS PVDFKYLKSK RFNRTTKCGF WKATGKDRDI RTGDTDNTVI GTKKTLVYYQ 120
GRVSCGVKSN WVIHEYHAVT FHENQRTFVL CCLMKKPGKT TEGGTDPLIC DEGEPSRSMI 180
SDYENQPTAE GIASEGTFTG IEAIFQATPW AENCFSPIQQ SLTLIEQEGA SFPNYAFNNA 240
YFRNEDNIMQ TPFETTKEDE FLNLILADES IVINEENKHD FVNSSTQSES LKRVYCESSD 300
TDAEVISKLD DNIVDISTAC NDYPNSDEYY SSKRFKSSHD AVHGGICFLP SNLEANQEKN 360
ESMFQDSFWG AETSSCDSTL DKPLEINYID ISSSPFTPWR *
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-26 | 7 | 156 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-26 | 7 | 156 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-26 | 7 | 156 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-26 | 7 | 156 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-26 | 7 | 156 | 23 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-26 | 7 | 156 | 20 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-26 | 7 | 156 | 20 | 165 | NAC domain-containing protein 19 |
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