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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.16G016600.1.p |
| Common Name | GLYMA_16G016600, LOC100779816 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 432aa MW: 49684.8 Da PI: 4.6659 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.16G016600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 135.9 | 2.6e-42 | 5 | 135 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
+G+ F+Ptdeelv++yLk+k+ +++ + ++i +vd+++vePwdLp +v+ + +ew+fFs+ d ky+++kr nr+tk g+Wk tg
Glyma.16G016600.1.p 5 VGYGFRPTDEELVKFYLKHKLLDDDPCV-HFILDVDLCEVEPWDLPLlladsAVRFNGREWFFFSPVDYKYSNSKRVNRTTKCGFWKPTG 93
699********************99777.89***************5466665556889******************************* PP
NAM 88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
kd+ + sk +++++g+kktLv+y+gr ++g+k++Wv+hey++
Glyma.16G016600.1.p 94 KDRGIRSKdTNNVIGTKKTLVYYQGRVSSGVKSNWVIHEYHA 135
*******977778***************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 432 aa
Download sequence Send
to blast |
MDDIVGYGFR PTDEELVKFY LKHKLLDDDP CVHFILDVDL CEVEPWDLPL LLADSAVRFN 60
GREWFFFSPV DYKYSNSKRV NRTTKCGFWK PTGKDRGIRS KDTNNVIGTK KTLVYYQGRV 120
SSGVKSNWVI HEYHAVTFHE SQRTFVLCRL MKKPGKTTEG GTDALICDEG GPSRSMVSDY 180
ENQATTQGIP SGGTFTGMET TFQGMHLAEK YFSPTQQSPT GIEQEEPSFT NYPFNNAYFR 240
NEDNFMQTPF ETKEEDAFLN SIFVDENLVI NEESMHAFVN SSTQSESLRR VYCESSDTDA 300
EVVSERDDNI VDVSTMCNEY PNSDGYYSSE RFESSHGAVQ DSLCLLSTNH EANQETMESI 360
LQNNFWGMEQ SYCDSTANKP LEINYTEISS SPSTRRRWIN QYHPRPDYFT SQKTDEDLRH 420
RGRFQTMQYR M*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-29 | 6 | 153 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-29 | 6 | 153 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-29 | 6 | 153 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-29 | 6 | 153 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 2e-29 | 6 | 153 | 23 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-29 | 6 | 153 | 20 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-29 | 6 | 153 | 20 | 165 | NAC domain-containing protein 19 |
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