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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.16G006500.7.p |
Common Name | GLYMA_16G006500, LOC100782501 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 647aa MW: 71372.8 Da PI: 6.7171 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.16G006500.7.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.1 | 8.5e-08 | 533 | 581 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48
+WT E +lv++v + G g+W+ I r Rt ++k++w+++l
Glyma.16G006500.7.p 533 AWTLVEVIKLVEGVSRCGAGRWSEIKRLSFasySYRTSVDLKDKWRNLL 581
7**************************99999*99************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009651 | Biological Process | response to salt stress |
GO:0031627 | Biological Process | telomeric loop formation |
GO:0046686 | Biological Process | response to cadmium ion |
GO:0000783 | Cellular Component | nuclear telomere cap complex |
GO:0003691 | Molecular Function | double-stranded telomeric DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 647 aa
Download sequence Send
to blast |
METVVGIEDN DDGRFEDSGV DRSSSALSSP KQISNPIVYK LVRVEGDGKL VPATDDEVME 60 VGDFLEYENS EMHVVTNTGQ SLECISIERS SSGKLRLECL EGTAEADLGK LNAKLQILQK 120 VKEEEKHRIS CGSPVHSHEN IDSQCSADKF PVMDGKVQSE TPCQEIPSIA SSFNYTHSNQ 180 SGSIDQCSRP SEGVIESGSS ASAVYSNLKS DISMSDGEIC LDKLSIRELH ELFKVTFGRE 240 TTVKDKQWLK RRIAMSLTNS CDVSATTFII KDNKIVRKFE EDSSGNMNAG SLISSENMTE 300 EDVNFKDSSA VDACGIDDNQ VVSETRSENG LEYENYQTGQ RAAKRIRRPT KRYIEELSEN 360 ESREHNPRLS ISNKTVGFGH VSPTSNVRPA RNAFSEARTY STRLDSLGGS NVQIPCVSRV 420 RRSRPRKDIA SLMKFHPTGM GEAEKLSNKL LEHSSDAGSD FSDKVLKSRM PAKFHQPSSS 480 EPVKEQCPVI CPIELRQELR PKRADPSGHT SDDNNIVTVP TAKGGMRRKH HRAWTLVEVI 540 KLVEGVSRCG AGRWSEIKRL SFASYSYRTS VDLKDKWRNL LKASFALAPA DEGINSRKHG 600 TAPIPEKILL RVRELAEMNS QVPPNYSSSQ LASGGGSVHG DRSGYL*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 420 | 426 | RRSRPRK |
2 | 420 | 427 | RRSRPRKD |
Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.24229 | 0.0 | cotyledon| flower| hypocotyl| leaf| root| somatic embryo |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | FJ560707 | 0.0 | FJ560707.1 Glycine max transcription factor MYB884 mRNA, complete cds. |