 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.15G273400.1.p |
Common Name | GLYMA_15G273400, LOC100789060 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
C2H2 |
Protein Properties |
Length: 343aa MW: 38492.2 Da PI: 7.1945 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G273400.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 18.2 | 6.7e-06 | 187 | 204 | 3 | 20 |
ETTTTEEESSHHHHHHHH CS
zf-C2H2 3 CpdCgksFsrksnLkrHi 20
C+ C+ksF+r nL+ H+
Glyma.15G273400.1.p 187 CHVCSKSFNRYNNLQMHM 204
*****************9 PP
|
2 | zf-C2H2 | 15 | 7.2e-05 | 269 | 291 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C +C+k+F k + ++H +++
Glyma.15G273400.1.p 269 YMCRKCDKTFAVKGDWRTHEKNC 291
89*****************9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MTDPKSNVYT ETFNFMPLYS HHSSFTSQSS LLSSYPLSYS NTNTNTFSNQ SDTSSSSCAA 60 PPPSSPLREA LPLINNIKQK KNEPSNGGEE VEEEGQKKRD IDETLLTSIT EEGDDDETVT 120 VALQIGLPSV ATSDLNGSRK IFEACAKMDV KEDVRVISGH PLDRLNNIQY WIPTPSQILI 180 GPTQFLCHVC SKSFNRYNNL QMHMWGHGSQ YRKGPDSLKG TQPSAMLRLP CFCCAPGCKH 240 NIDHPRTRPL KDFRTLQTHY KRKHGIKPYM CRKCDKTFAV KGDWRTHEKN CGITWYCLCG 300 SDFKHKRSLK DHIKAFGHDH GVVDIDCMQE DEAASEIEHD GG*
|
Expression --
Description ? help
Back to Top |
Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |