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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G271900.1.p |
Common Name | GLYMA_15G271900, LOC100785696 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 457aa MW: 50724.4 Da PI: 6.5085 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G271900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 36.5 | 8.7e-12 | 384 | 429 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L++l P + k s a++L +Ave+Ik+Lq
Glyma.15G271900.1.p 384 SIAERERRTRISERIKKLQDLFPRS----EKPTSTADMLDLAVEHIKDLQ 429
689*********************8....677*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MPFVPFKVIA KMSVMYSPVL NYSDVEYQLW KNQDMDSSIG HPQQHCHQSN SGLLRYCSAP 60 SSMLASLIDN TIHGCVNEEP FTSENQQQQQ HYLPSTSSEM ETMLSKMPPS NIGWSNSEPL 120 QEFGGKPVKQ EIGQSVPQGP PKQNGYSYGG SQLIYQSQQI QGLPNGSSIA SISAFDGSFG 180 AVNSMASEDS IQSKMGVRNC SNLFRQKSSP AGFFSIENDL AALREVGSFK DNDVSNGQAT 240 ASTSGLHSSL TFSSRSSSCL KQMPPQIAEN GNESLEENYD QSRNLVNDNG SSKCYIPSFT 300 NEFWESSAFN APKTENEDEI MFSTSNGLES QETDFSYQNH GLTHHLSLPS SSTKMSSIEM 360 FLQIQGSVPY KIRAKRGFAT HPRSIAERER RTRISERIKK LQDLFPRSEK PTSTADMLDL 420 AVEHIKDLQQ QVQILSDRKA KCKCTRNEKH YTRTCA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU215941 | 0.0 | GU215941.1 Glycine max clone BAC GmWBb_74M16, complete sequence. |