PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G269600.2.p
Common NameGLYMA_15G269600
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family MYB_related
Protein Properties Length: 748aa    MW: 81101.1 Da    PI: 9.8056
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G269600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-103581344
                         SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHH CS
      Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrw 44
                          W t+E++ll++av+++G ++W+++a +++     +  t+ +c  ++
  Glyma.15G269600.2.p 35 VWGTWEELLLACAVNRHGFKDWDAVAMEVQsrttrLLATAHHCEQKF 81
                         6*****************************88888888888887765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.4E-42568IPR009057Homeodomain-like
SuperFamilySSF466898.97E-53168IPR009057Homeodomain-like
PfamPF002493.2E-93581IPR001005SANT/Myb domain
CDDcd001677.97E-63667No hitNo description
SMARTSM002978.4E-12133458IPR001487Bromodomain
Gene3DG3DSA:1.20.920.102.6E-18343456IPR001487Bromodomain
SuperFamilySSF473705.36E-18356458IPR001487Bromodomain
PfamPF004394.5E-10362436IPR001487Bromodomain
CDDcd043695.26E-15362453No hitNo description
PROSITE profilePS5001414.514367439IPR001487Bromodomain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    Send to blast
MENHQNHKVE SEPDIEKNHH HRHQQQQQQQ HRNEVWGTWE ELLLACAVNR HGFKDWDAVA  60
MEVQSRTTRL LATAHHCEQK FDDLSRRFAD QCNDDVPPSR QNGGAAAISD HVPWLDELRK  120
LRVAELRREV QRSDVSILSL QLEVKRLEEE KTKEKDGKDD KKPDLAVSGE LRPENDKTGG  180
EVDEAGPANS EPEERTANNT DKTLPTMGDE SDRENQSVNE SNSTGSRFEK TGDGDAKAGT  240
GPAPVQTGSI EPDPVLRKGK PVGEESNNGS YDALAKVPTC ESVPPSEERK VEEDDNSSEL  300
HDSVAHSGEG GTRESSEVQS SASLTRKRKT RRRKEVSGGG GASSPAENDE LATVKSEPLV  360
GVLELIKGHE HSSLFERRLE SQQDTDRYKD LVKQPMDLET IQLRLQKGHY SSCTSAFFRD  420
LLLLFTNATV FFSHDTLESQ VGRQLHRLAT TEMKNHGQAQ SDPIPRKNDS LPPNASLAKP  480
DSLISKNKAS GPILVCRKRS SMLAKPSSAT FGQKGDQPTF NDKKERPSSD AKPPMKPSSS  540
DTDEEELPKA KEKPVTGARS LRRSYKNLNN NNNKKPSSNS TPKTGSSGNK PSETVKPEKS  600
KAEGGPDKKR NAAADFLKRI KRNTSAEASK GGSGGSGGGG SGGGGGSSSS SKGGGGGNGV  660
KEQKKMVNNG KGDKGKERAS RHNNVGGGSG SGDKRNSKNV ENNSQSKRSV GRPPKKAAET  720
NAGSAKRGRE SSASAGKDKR PKKRSKK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1324329TRKRKT
2327334RKTRRRKE
3632646SGGSGGGGSGGGGGS
4738746KRPKKRSKK
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.188420.0flower| root
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G269600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014623573.10.0uncharacterized protein LOC100779988 isoform X1
TrEMBLA0A0R0GF960.0A0A0R0GF96_SOYBN; Uncharacterized protein
STRINGGLYMA15G42440.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44430.17e-81DNA-binding bromodomain-containing protein