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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G222100.1.p |
Common Name | GLYMA_15G222100 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
FAR1 |
Protein Properties |
Length: 370aa MW: 41577.7 Da PI: 5.1818 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G222100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 31.6 | 5.6e-10 | 64 | 108 | 1 | 45 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45
+fYn+YA++vGFs+ + + ++ k +g i++ +f Cs+e +++++
Glyma.15G222100.1.p 64 SFYNAYARHVGFSTHVGQFNRAKPDGPIITWDFACSREVFKRKNI 108
5***************************************99875 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 370 aa
Download sequence Send
to blast |
MDVEAVDEGE NSDRPVSENV ETGKGQEQNM TVNLAEREVN NQNGDAYRKP QVGMLFESED 60 AAKSFYNAYA RHVGFSTHVG QFNRAKPDGP IITWDFACSR EVFKRKNITI IPLFFRQYER 120 SLEHSLEKEI EADYETICNT PVLKTPSPME QQAANMYTKK IFAKFQEELV ETFAYTANNV 180 EDDGVISKYR VAKYVHDHKA YMVTLNISEM KVNCSCQMNA KSDIGTDEKI TDPIDIENLT 240 VRFNSLCREA IKLAEEGAVS VETYNATMNA LREGAKRVGI MKKNVAKVTP PNTQGNGSCL 300 KDHSKNSPSS ISDVIPSLWP WQDSVSHHFN LNDLGLPVTD LNTPSMAPVS IHRDGCPYLF 360 QVYDLDHLK*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015039 | 1e-137 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |