PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G215500.2.p
Common NameGLYMA_15G215500, LOC102666857
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Dof
Protein Properties Length: 436aa    MW: 48476.4 Da    PI: 7.5398
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G215500.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1214.2e-3872132262
               zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                          ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rn+PvG+g+rknk+s 
  Glyma.15G215500.2.p  72 PDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNIPVGTGKRKNKHSA 132
                          78999*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-2869129IPR003851Zinc finger, Dof-type
PfamPF027011.0E-3173130IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.35176130IPR003851Zinc finger, Dof-type
PROSITE patternPS01361078114IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MNGLEESTNN EVDVPLNEVS NKLIDPHKYG YGTPNLNKNT TLKLVPKVVH RTNEHRNAKR  60
EIDHQEKVFK KPDKVLPCPR CNSLETKFCY FNNYNVNQPR HFCKNCQRYW TAGGTIRNIP  120
VGTGKRKNKH SAQYCQIPMT PDAASVIQTD SKPASDMLLL SNELPVTSRP IKGGEETPLS  180
ESLETVLSLN GLTKIEVDSS TLKDDDDEEP SSSSMRSSEI EQLGLPQHSN GLVPLHSFHY  240
YHVPSWPYQW NPCWNVKEFR PSNISSRAVY TDSSTMMAVP GFSIPTVILP GVPYSYLGFM  300
SSWAEQKEEA SLVGSAFSGI SLSSCSVSNS TCSGNRSPTL GKHPRDGSTP GEDAMKQNLW  360
VPKTVRINDP EEAANSSIWS TLGTKSEQNK FIMKGSVFKS FEPKSQASPH ILDDNQILRA  420
NPAAFSRSES FQERM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G215500.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006598005.10.0cyclic dof factor 3 isoform X2
TrEMBLK7MCW20.0K7MCW2_SOYBN; Uncharacterized protein
STRINGGLYMA15G29870.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.22e-56cycling DOF factor 2