PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.15G215500.2.p | ||||||||
Common Name | GLYMA_15G215500, LOC102666857 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | Dof | ||||||||
Protein Properties | Length: 436aa MW: 48476.4 Da PI: 7.5398 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121 | 4.2e-38 | 72 | 132 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rn+PvG+g+rknk+s Glyma.15G215500.2.p 72 PDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNIPVGTGKRKNKHSA 132 78999*****************************************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-28 | 69 | 129 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.0E-31 | 73 | 130 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.351 | 76 | 130 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 78 | 114 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 436 aa Download sequence Send to blast |
MNGLEESTNN EVDVPLNEVS NKLIDPHKYG YGTPNLNKNT TLKLVPKVVH RTNEHRNAKR 60 EIDHQEKVFK KPDKVLPCPR CNSLETKFCY FNNYNVNQPR HFCKNCQRYW TAGGTIRNIP 120 VGTGKRKNKH SAQYCQIPMT PDAASVIQTD SKPASDMLLL SNELPVTSRP IKGGEETPLS 180 ESLETVLSLN GLTKIEVDSS TLKDDDDEEP SSSSMRSSEI EQLGLPQHSN GLVPLHSFHY 240 YHVPSWPYQW NPCWNVKEFR PSNISSRAVY TDSSTMMAVP GFSIPTVILP GVPYSYLGFM 300 SSWAEQKEEA SLVGSAFSGI SLSSCSVSNS TCSGNRSPTL GKHPRDGSTP GEDAMKQNLW 360 VPKTVRINDP EEAANSSIWS TLGTKSEQNK FIMKGSVFKS FEPKSQASPH ILDDNQILRA 420 NPAAFSRSES FQERM* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.15G215500.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006598005.1 | 0.0 | cyclic dof factor 3 isoform X2 | ||||
TrEMBL | K7MCW2 | 0.0 | K7MCW2_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA15G29870.2 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39660.2 | 2e-56 | cycling DOF factor 2 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.15G215500.2.p |
Entrez Gene | 102666857 |