PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G215100.2.p
Common NameGLYMA_15G215100, LOC100796801
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 282aa    MW: 31441.2 Da    PI: 5.4933
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G215100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.61.2e-09756154
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                         r++ +  rE+ RRdriN+ f eL  +l ++     +K++Ka+iL  +++ +k+L
  Glyma.15G215100.2.p  7 RKTQKADREKLRRDRINEQFVELGNILDPD----RPKNDKATILCDTIQLLKDL 56
                         6788999********************997....79************999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-14576IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-13678IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.995656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.42E-6756No hitNo description
SMARTSM003533.1E-51262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MDCSAARKTQ KADREKLRRD RINEQFVELG NILDPDRPKN DKATILCDTI QLLKDLISQV  60
SKLKDEYAML NEESRELTLE KTDLREEKAS LKSDIDNLNN QYQQQLRTMF PWTAMEHSVM  120
MAPSSYPYPV PMAVPPGPIP MQPYPFFANQ HPAVISNPCS TYVPYLAPNT IVEQQSTLYV  180
SPPLHPGARP NVSGKQESKS KSSRESMAEK NEESNDVTTD LELKTPGSSA DQDLSSGQRK  240
SSKLSRRESS CTEWSSLGRC SSCSVQDSSS SSVVASRKDN E*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.185550.0flower| leaf
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G215100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0944370.0BT094437.1 Soybean clone JCVI-FLGm-24H6 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003546649.10.0transcription factor bHLH121
SwissprotQ9LT239e-91BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A0B2R7H60.0A0A0B2R7H6_GLYSO; Transcription factor bHLH121
TrEMBLI1MI880.0I1MI88_SOYBN; Uncharacterized protein
STRINGGLYMA15G29630.20.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.11e-76bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]