 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.15G176500.1.p |
Common Name | GLYMA_15G176500, LOC100781613 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
GRF |
Protein Properties |
Length: 366aa MW: 41453.7 Da PI: 8.0704 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G176500.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 77.9 | 1e-24 | 77 | 120 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
Glyma.15G176500.1.p 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120
79***************************************987 PP
|
2 | QLQ | 56.8 | 6.6e-20 | 9 | 43 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+FT++Q+q+L++Q+l+yKy+a++ +Pp+Ll+ i+
Glyma.15G176500.1.p 9 PFTPSQWQELEHQALIYKYMASGISIPPDLLFTIK 43
8******************************9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MMNGRNRFPF TPSQWQELEH QALIYKYMAS GISIPPDLLF TIKRSYFDSP LSSRLLPNQP 60 QHFGWNYLQM GLGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VLKSTTTPSS STTNSNASST QQAISSITKI NSTLSPLASS ETHQHHHYPQ HYGSFLYHHH 180 PPSRSSGIGL SFEDNSAPLF LDTGSCSQSN TDCRSRYVYG EKEEVDEHAF FTEPCGVMKS 240 FSASSMDDSW QLTPLTMSSS SSSSKQRSSF GLSSDYSCLQ LQSHSKQQQQ EHHQDQGCYM 300 FGAGQVVKEE PQKTVHRFFD EWPHKGREGS WLDLDDKSST TQLSISIPTS SHDFSTFSSR 360 THHDG*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 1e-121 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |