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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G144500.1.p |
Common Name | GLYMA_15G144500, LOC100775359 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
FAR1 |
Protein Properties |
Length: 759aa MW: 86769.4 Da PI: 6.7313 |
Description |
FAR1 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G144500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | FAR1 | 63.5 | 5.9e-20 | 59 | 152 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHn 86
+fY+++Ak++GFs+r+++++ + + +t+r+f+C + g+++ + +++ k +r+r+++r+gC+a +++ k++ +w+vt +++ Hn
Glyma.15G144500.1.p 59 EFYCSFAKQCGFSIRRHRTRGKdGVGRGVTRRDFTCHCGGYPQIKPSDDGKVQRNRKSSRCGCQAYMRIVKRSdfdVPEWRVTGFRNIHN 148
6***************9998874556679*******************9*******************99998776789*********** PP
FAR1 87 Hela 90
Hel
Glyma.15G144500.1.p 149 HELL 152
**96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 759 aa
Download sequence Send
to blast |
MSEGTSLVLE SSENGTDLSQ DDIGTIEEIA EETILSRQTS VNLVPFIGQR FVSQEAAYEF 60 YCSFAKQCGF SIRRHRTRGK DGVGRGVTRR DFTCHCGGYP QIKPSDDGKV QRNRKSSRCG 120 CQAYMRIVKR SDFDVPEWRV TGFRNIHNHE LLKSNEVRLL PAYCPISPDD KSRICMFAKA 180 GMSVRQMLRL MELEKGIKLG CLPFTEIDVR NLLQSFRNVD RDNDAIDLIA MCKRLKDENH 240 NFKYEFKIDS NNRLEHIAWS YSSSIQSYEA FGDAVVFDTT YRVEAYDMLL GIWLGVDNNG 300 MTCFFSCALL RDENIQSFSW ALKAFLGFMK GKAPQTILTD HNMWLKEAIA VELPQTKHAF 360 CIWHILSKFS DWFSLLLGSQ YDEWKAEFHR LYNLEQVEDF EEGWRQMVDQ YGLHANKHII 420 SLYSLRTFWA LPFLRHYFFA GLTSTCQSES INAFIQRFLS VQSQLDRFVE QVVEIVDFND 480 RAGATQKMQR KLQKVCLKTG SPIESHAATV LTPDALSKLQ EELVLAPQYA SFLVDEGRFQ 540 VRHHSQSDGG CKVFWVACQE HISCSCHLFE FSGILCRHVL RVMSTNNCFH IPDQYLPARW 600 RGNNSSSVNH YRGTTSRDQS ERIQFLESMV STFLVESIET EERLDVACEQ ISMALSRIKT 660 FPRSPHGVND IAYSYPSDSL ILPQVEDTDG MIHGFTITNP HDSITTGKLK ERRARDGVDL 720 TRKRRQFSLP SCAQYGHDVS DCSIMAGDNM SGDALGYL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription activator involved in regulating light control of development. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |