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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.15G077100.1.p |
| Common Name | GLYMA_15G077100, Glyma15g08370.1, LOC100803173 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
ERF |
| Protein Properties |
Length: 220aa MW: 23669.3 Da PI: 9.7464 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G077100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 64.4 | 2.4e-20 | 22 | 71 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+++GVr ++ +gr++AeIrdp k++r++lg+f+taeeAa+a++aa+++++g
Glyma.15G077100.1.p 22 HFRGVRKRP-WGRFAAEIRDPA---KKTRVWLGTFDTAEEAARAYDAAAREFRG 71
69*******.**********83...36*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MAPRDKTSAV KPSGNAGVKD LHFRGVRKRP WGRFAAEIRD PAKKTRVWLG TFDTAEEAAR 60
AYDAAAREFR GPKAKTNFPL PSENFKNASP SQSSTVESSS RDRDVAADSS PLDLNLAPVA 120
VSSARFPFRN QFPVFPGAVP AANQVMYFDA VLRAGMAGPR GFAFGYNPHP VAASEYHATT 180
SDSDSSSVID LNHNEGVVKG NGSRMFDLDL NHPPPHEIA*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, in cultured cells and at low levels in buds and leaves. Highly expressed in cell culture, especially during the exponential phase. {ECO:0000269|PubMed:11440157, ECO:0000269|PubMed:7756828}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Acts as a transcriptional repressor. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. May regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:12654868, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and to lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemical transient expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Not influenced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031089 | 0.0 | KT031089.1 Glycine max clone HN_CCL_207 AP2-EREBP transcription factor (Glyma15g08370.1) mRNA, partial cds. |
