PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G063300.1.p
Common NameGLYMA_15G063300, LOC100791520
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family GeBP
Protein Properties Length: 438aa    MW: 48351.4 Da    PI: 5.297
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G063300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573113.81.1e-35187286198
               DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd..didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqki 88 
                          k+fqrlwseeDe+++L+G+++f++ktg +p +  + +af++f+kks+++++s++ql eK+rrLKkKf+++  k k+g+ p+fsk+hdqk 
  Glyma.15G063300.1.p 187 KKFQRLWSEEDELAILKGVVEFTSKTGLDPLKfpNANAFHDFMKKSLHVEFSSNQLKEKLRRLKKKFETQAGKGKNGDAPKFSKPHDQKF 276
                          68**************************877666******************************************************** PP

               DUF573  89 felskkiWgs 98 
                          felskk Wgs
  Glyma.15G063300.1.p 277 FELSKKAWGS 286
                          ********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.5E-32189285IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MAQKQKLRPS PLDEPPTASS SDSEEEEEQQ QQQPSSQQHE EEEEEVSSGE EEEASSEEEE  60
DENLPPPPIS KNPPPPPPSN PQPQPTSSES ETESGSETES EPHPTPVKVK PLASKPMDQA  120
QKPKAQPSPA PPPPKSASKR PAENNNNNAR VADPKRAKKK ATESSSAAAI SDDEMEEDGK  180
KSGDNSKKFQ RLWSEEDELA ILKGVVEFTS KTGLDPLKFP NANAFHDFMK KSLHVEFSSN  240
QLKEKLRRLK KKFETQAGKG KNGDAPKFSK PHDQKFFELS KKAWGSEDGG VANGSVEKPK  300
SNGNAAKSPN PKKKESGSRN VASAKKPKPE TNPEPAPVPS LEFKESERME IDQKPDGGDA  360
CLFLRELVRY KEGANVSRLD EDDVKRGLEL IEESKRAELR GKWKKLHHAE MELFANRSEL  420
IGEQTKLILE ALRSSNH*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.279580.0meristem| root| somatic embryo| stem| vegetative bud
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G063300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003547113.10.0STOREKEEPER protein
TrEMBLK7M9X40.0K7M9X4_SOYBN; Uncharacterized protein
STRINGGLYMA15G06890.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Representative plantOGRP4222523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-21DNA-binding storekeeper protein-related transcriptional regulator