PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G049000.2.p
Common NameGLYMA_15G049000
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 120aa    MW: 13430.5 Da    PI: 7.5085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G049000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.22.8e-164990445
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         l+++rr++kNRe+A rsR+RK+a++ eLe  v  Le+eN  L
  Glyma.15G049000.2.p 49 LQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENAVL 90
                         89*************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-1346109IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.0254890IPR004827Basic-leucine zipper domain
PfamPF001707.5E-154890IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-125092No hitNo description
CDDcd147072.94E-1950101No hitNo description
Gene3DG3DSA:1.20.5.1706.4E-155192No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MAEVVAGTES EDNMSMSLQD LLGSHSHGGR RVKRKSVVEE PLVVDKVTLQ KQRRMIKNRE  60
SAARSRERKQ AYTVELESLV THLEEENAVL LQLAVCMYLS IYAFSVLSCL YNILFSLVG*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.15G049000.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922841e-104BT092284.1 Soybean clone JCVI-FLGm-10F13 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003547064.11e-60G-box-binding factor 4
SwissprotQ0JHF11e-17BZP12_ORYSJ; bZIP transcription factor 12
TrEMBLI1MDS32e-80I1MDS3_SOYBN; Uncharacterized protein
STRINGGLYMA15G05440.14e-60(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-21bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]