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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G037300.2.p |
Common Name | GLYMA_15G037300, LOC100780881 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 717aa MW: 79307.2 Da PI: 8.2978 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G037300.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.4 | 6.8e-08 | 616 | 665 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++
Glyma.15G037300.2.p 616 RRPFSVAEVEALVQAVEKLGTGRWRDVKLHAFdnaKHRTYVDLKDKWKTL 665
6789999***********************999**************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 717 aa
Download sequence Send
to blast |
MVLQKRLDYS FYGYHVPTKR RATRSAKRRA TFQRRLEDNQ MCAFDLLATI ADNLLQEKQN 60 PTISSDRSSE KDRDGFSKVE CQDANKPFKT ELSDEASCDR KCQHEFVREG CPDANKPFKA 120 ELSDEGSSDR KCFSNISSQL YNQNCCLKEL LQHEIDGHSC IASIVTSSSC SEKIVAERLV 180 DGKGHNGVEN LASKVELGSS GCLESSGCKL DGDVSKVKDG KVGKVPIDTG TGMCCFEDPL 240 DEKPPALISS CGNAKMSGYD DSKPQSSLSK GCDNVLVDSR DDDENFSGYA HPSTKINSFK 300 QITCIDDRKI KKTLDSKYHK VSQESKHDIL SNSVLDGNLK SVYSSRKNYY KSQRSQMCIP 360 FKKRKLFNCS SSDTNSNGYI RSDDTCYSPK NDTNQSVSCS SSDHGTSSLG HSALRSRDSH 420 VKLRIKSFRV PELFIEIPET ATVGSLKRTV MEAVTAVLGG GLRVGVILHG KKVRDDSKTL 480 LQTGISHDNH LDALGFALEP NCSQNRSSAC ATTDSLCVPG ADMHQPLIGY PSSRAAIHQR 540 IQGFSNMLAE HQATGLGNLV ESDHDSAPSP INTSGEKNLT DSKELITVPE MGMEALAVLP 600 VHQKSKRTEI APRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLHAFDNA KHRTYVDLKD 660 KWKTLVHTAR ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ TKQQLKHHST KPCLLL*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed ubiquitously. {ECO:0000269|PubMed:15364931}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds specifically to the plant telomeric double-stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |