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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G037300.1.p |
Common Name | GLYMA_15G037300, LOC100780881 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB_related |
Protein Properties |
Length: 721aa MW: 79710.7 Da PI: 8.3592 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G037300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 24.4 | 6.9e-08 | 620 | 669 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47
r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++
Glyma.15G037300.1.p 620 RRPFSVAEVEALVQAVEKLGTGRWRDVKLHAFdnaKHRTYVDLKDKWKTL 669
6789999***********************999**************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 721 aa
Download sequence Send
to blast |
MVLQKRLDYS FYGYHVPTKR RATRSAKRRA TFQRRLEDNQ MCAFDLLATI ADNLLQEKQN 60 PTISSDRSSE KDRDGFSKVE CQDANKPFKT ELSDEASCDR KCQHEFVREG CPDANKPFKA 120 ELSDEGSSDR KCFSNISSQL YNQNCCLKEL LQHEIDGHSC IASIVTSSSC SEKIVAERLV 180 DGKGHNGVEN LASKVELGSS GCLESSGCKL DGDVSKVKDG KVGKVPIDTG TGMCCFEDPL 240 DEKPPALISS CGNAKMSGYD DSKPQSSLSK GCDNVLVDSR DDDENFSGYA HPSTKINSFK 300 QITCIDDRKI KKTLDSKYHK VSQESKHDIL SNSVLDGNLK SVYSSRKNYY KSQRSQMCIP 360 FKKRKLFNCS SSDTNSNGYI RSDDTCYSPK NDTNQSVSCS SSGMSKDHGT SSLGHSALRS 420 RDSHVKLRIK SFRVPELFIE IPETATVGSL KRTVMEAVTA VLGGGLRVGV ILHGKKVRDD 480 SKTLLQTGIS HDNHLDALGF ALEPNCSQNR SSACATTDSL CVPGADMHQP LIGYPSSRAA 540 IHQRIQGFSN MLAEHQATGL GNLVESDHDS APSPINTSGE KNLTDSKELI TVPEMGMEAL 600 AVLPVHQKSK RTEIAPRRIR RPFSVAEVEA LVQAVEKLGT GRWRDVKLHA FDNAKHRTYV 660 DLKDKWKTLV HTARISPQQR RGEPVPQELL DRVLTAHAYW SQQQTKQQLK HHSTKPCLLL 720 *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed ubiquitously. {ECO:0000269|PubMed:15364931}. |
Functional Description ? help
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Source |
Description |
UniProt | Binds specifically to the plant telomeric double-stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |