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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.15G033600.1.p |
| Common Name | GLYMA_15G033600 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
C2H2 |
| Protein Properties |
Length: 346aa MW: 38955.7 Da PI: 7.8764 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G033600.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.8 | 8e-05 | 183 | 202 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
++Cp C k+F+r n++ H+
Glyma.15G033600.1.p 183 FSCPLCFKTFNRYNNMQMHM 202
89*****************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MTHPYCSNDF NAWFDLNSPC LFSTSSSPCS NNPPFYFPTS NTNYLHNCTN NDISFTQHIQ 60
SSPSSFPLPK EELPLLNLSP ARGEDLESSF SAMKVNKEKE KELSMSANNN SLDDETAVTV 120
ALHLGLPSTT TTTTSSADLT SNVYSDKEDK KDTVASEYSP TRINKGQYWI PTPAQILIGP 180
TQFSCPLCFK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTAMLRLPCY CCAPGCKNNI 240
DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCCKAFAVRG DWRTHEKNCG KLWYCSCGSD 300
FKHKRSLKDH IKAFGNGHKA YGIDSCLDQD DEAGSEIEQE NNESF*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in developing carpels (PubMed:17600712). Expressed in the shoot apical meristem and the replum (PubMed:25039392). {ECO:0000269|PubMed:17600712}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator required for normal differentiation of the ovary transmitting tract cells and pollen tube growth. In Arabidopsis, the transmitting tract facilitates the transport of pollen tubes to the ovules for fertilization (PubMed:17600712). May play a role in the regulation of AGL8/FUL, which is required for normal pattern of cell division, expansion and differentiation during morphogenesis of the silique (PubMed:23515580). Plays a role in replum development by the activation of the homeobox protein KNAT1 (PubMed:25039392). {ECO:0000269|PubMed:17600712, ECO:0000269|PubMed:23515580, ECO:0000269|PubMed:25039392}. |
