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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.15G032800.1.p |
| Common Name | GLYMA_15G032800, LOC100815102 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 744aa MW: 85338.7 Da PI: 6.9299 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G032800.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 83.8 | 2.7e-26 | 29 | 114 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fY+eYAk++GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ dgkw+v+++++eHnHel p
Glyma.15G032800.1.p 29 FYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRLDGKWYVYSFVKEHNHELLP 114
9***************************************999877....9************************************975 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009585 | Biological Process | red, far-red light phototransduction |
| GO:0010018 | Biological Process | far-red light signaling pathway |
| GO:0042753 | Biological Process | positive regulation of circadian rhythm |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 744 aa
Download sequence Send
to blast |
MDSSAVVGST ISEPHNDMEF ESHEAAYAFY KEYAKSAGFG TAKLSSRRSR ASKEFIDAKF 60
SCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRLDGKWY VYSFVKEHNH ELLPAQAHFF 120
RSHRSSDPLS NDVRMRRRKN SNAVSKLFTA NQNVDCLENF VKHQHDKGRS LVLEAGHAHL 180
LLELFMHMQE ENPKFFYAVD LNEEHRLRNV FWVDAKGLED FTYFSDVVSF DTTYFTSKYK 240
IPLVLFIGVN HHIQPTLLGC ALIADETIYT FAWLLQTWLI AMGERTPQVF LTDQNEAIKA 300
AVAAFLPGTR HCFCLWHILE KIPKQLEFLG AWHDSFLEKF NNCIYKSCTE EQFDKRWWEL 360
VDDFNLRDVE WVQSLYDDRT CWVPTFMKDI SFAGLSTSSR SESLNSLFDK YIQVDTSLRD 420
FIEQYRVILE DRHEEEAKAN FDAWHETPDL KSPSPFEKQM LLVYTHEIFR KFQVEVLGAA 480
ACHLKKENDC MTTTYTVKDF ENNQTYMVEW NTSTSNICCS CHLFEYKGYL CRHAIVVLQM 540
SGVFSIPPKY ILQRWTNAAM SRHPIGGKME EVQSKVRRFN DLCRRAIILG EEGSLSQESY 600
YMALGAISEA LKQCANLNSS VENGMRPDAS STHVVCNVEK EYQSIITSNN KIPDPKLNTG 660
KKAVRTGMAG RSLGSVENSE GNKGKVSQVE EGMVKDGFQQ MELIDSRSQS VMPMQFHGVV 720
PALFHNISSP FHTAPSTHLH ENR*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in hypocotyls, rosette and cauline leaves, inflorescences stems, flowers and siliques. {ECO:0000269|PubMed:15591448}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription activator involved in regulating light control of development. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated in hypocotyls by far-red light treatment. {ECO:0000269|PubMed:15591448}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
