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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.15G030200.1.p |
| Common Name | GLYMA_15G030200, LOC100810283 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
FAR1 |
| Protein Properties |
Length: 274aa MW: 31475.6 Da PI: 6.4387 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.15G030200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 82.6 | 6.7e-26 | 91 | 181 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHe 88
+fY +Y++++GF+vr++++++s+ n++++ ++fvCskeg+r+++ +++++ + + tr gC+a++++ ++++gkw+vtk+++eH+H+
Glyma.15G030200.1.p 91 EFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYLHRKDR-VlpPPPATREGCQAMIRLALRDRGKWVVTKFVKEHTHK 179
6******************************************99883333.2448899******************************* PP
FAR1 89 la 90
l+
Glyma.15G030200.1.p 180 LM 181
97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MQIAHLDCDL CCRAMDHQSG QGFDSDDSDL DMQAEISDKH EKVDEFSKNL EICGGEDEMF 60
VEQPVADIST DIEAVEPFIG MEFNSREEAR EFYIAYGRRI GFTVRIHHNR RSRVNNQVIG 120
QDFVCSKEGF RAKKYLHRKD RVLPPPPATR EGCQAMIRLA LRDRGKWVVT KFVKEHTHKL 180
MSPSKVPCRG SGKHLVSEDE KDKRIRELSL ELYNERQKCK RRCAAYEEQL NVILNDLEKH 240
TEHISKKVAA VVRSIREIEE EKSDSDGGQL EPS*
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| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
