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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G022000.1.p |
Common Name | GLYMA_15G022000, LOC100793830 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 446aa MW: 48891.4 Da PI: 6.3162 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G022000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 23.9 | 7.3e-08 | 353 | 393 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r+RR+ri +++ L++++P K++ a++L +A +Y+k L
Glyma.15G022000.1.p 353 ARQRRERISERIRVLQKIVPGG-----SKMDTASMLDEAANYLKFL 393
69******************95.....5****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MDGLSWDASS QLVANTPVLW STQSQDLEGD YHHSMPHLSS SVLNNQTGYA YPSSEKARGM 60 VQLSTMSEIM SMMPNTNLPQ RITATMPVKS GAAGASWEEA LISQSCPSLS VNMNQTSNYV 120 ADLNKAHQQQ QQLINGTQNG KATTCSLDQS IDCLLSATNN SNTDASVEDD GISMILSDCR 180 NLWNNFSYGS AASSGESDSN ASINARNSDM RYPSVSELDE SVSQSFSDQY LSQGRVIDSE 240 VICTKRSSSS CFSIAQNSSA TEGGFRLISE TSPKSKRPRW IHKHPGSSNI NFQQPNSSVT 300 PSFEEPDPEV IAQMKEMIYR AAAFRPVNLG LEAVEKPKRK NVRISTDPQT VAARQRRERI 360 SERIRVLQKI VPGGSKMDTA SMLDEAANYL KFLRSQVKAL ENLGNKLDTM NCPPTNIDFS 420 FNPSFPIQTH FPIQNPSSHI QYSKG*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Flowers. {ECO:0000269|PubMed:12679534}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |