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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G218700.1.p |
Common Name | GLYMA_14G218700, LOC100782665 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
C2H2 |
Protein Properties |
Length: 415aa MW: 45313.7 Da PI: 9.6449 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G218700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 15.8 | 3.9e-05 | 176 | 198 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
C++Cg++F+ ++L+ H+ + H
Glyma.14G218700.1.p 176 ACSHCGEVFPKMESLELHQAVrH 198
6******************9888 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 415 aa
Download sequence Send
to blast |
MALLTSLPEQ FSSTPKRHKR KPQQQQQKQK QKQKQKQKQK PASSWDQIKN LLTCKQMEES 60 RVHDPSKITG YSKLGSSCSS ICSFRDVVHG NTRVVHRSDN SSPESSSLGQ ETNGLLTRKP 120 VTTTTTRSAK SNGGATCTSS SSSSRGMQFR KLSGCYECHM IIDPSRLPIA RSTVCACSHC 180 GEVFPKMESL ELHQAVRHAV SELGPEDSGR NIVEIIFKSS WLKKDNPICK IERILKVHNT 240 QRTIQRFEEC RDTVKNRALG STKKNPRCAA DGNELLRFHC TTLTCALGAR GSSSLCASVP 300 GCSVCTIIRH GFQGGCGGGG DHARAKGVRT TASSGRAHDS VVCGDATRRA MLVCRVIAGR 360 VKRVVEDAPS EEEHVSYDSV AGYAGIYSNL EELVVFNPKA ILPCFVVIYK VPLC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |