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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.14G216400.1.p |
| Common Name | GLYMA_14G216400, LOC100794846 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
SRS |
| Protein Properties |
Length: 334aa MW: 36073.6 Da PI: 7.2692 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.14G216400.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 223.9 | 3.3e-69 | 117 | 268 | 3 | 153 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrel.kskkqsalsst 89
g+++CqdCGnqakkdC+h RCRtCCksrgf+C+thvkstWvpaakrrerqqql+a++++++++ + ++skr+re+ + +++ +l++
Glyma.14G216400.1.p 117 GGGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQQQQNQHPqfRGDHSKRHRESiEGAAAGSLACV 206
5789****************************************************9999888766788999999987233444455555 PP
DUF702 90 klssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153
++ +++ le ++P+e++s+avfrcv+vs++d +e +aYqtav+igGhvfkGiLydqG++
Glyma.14G216400.1.p 207 PVPI--TTTGLELGQFPPELNSPAVFRCVKVSAMDAPDERYAYQTAVNIGGHVFKGILYDQGMD 268
5555..56679999************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MAGFFSLGAG RQNKAEQEED QREENVNNAG GNNNSQFLFR NNVSEEIYNK GFEIWPQSSY 60
HHHQNLTNFY SFGVGPSRRN NHNNSSSNNV NDDVSVSFSD ESNRFGFTVM SSGGGGGGGM 120
NCQDCGNQAK KDCQHLRCRT CCKSRGFQCQ THVKSTWVPA AKRRERQQQL SALQQQQNQH 180
PQFRGDHSKR HRESIEGAAA GSLACVPVPI TTTGLELGQF PPELNSPAVF RCVKVSAMDA 240
PDERYAYQTA VNIGGHVFKG ILYDQGMDGP YAGAGCEGSS GVGGEAQPLS LMAAATTTTA 300
ATTTSGNPFE ASLYTAPMNA YMAGTHFFPP SRS*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: In young plants, detected at a low level only in the root tips and lateral root primordia. In fully open flowers, primarily observed in the filaments and anthers. {ECO:0000269|PubMed:20706774}. |
| Uniprot | TISSUE SPECIFICITY: Mainly expressed in the filaments of flowers, the shoot apex regions and pollen. Also present in leaves. {ECO:0000269|PubMed:20706774}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that binds DNA on 5'-ACTCTAC-3' and promotes auxin homeostasis-regulating gene expression (e.g. YUC genes), as well as genes affecting stamen development, cell expansion and timing of flowering. Synergistically with other SHI-related proteins, regulates gynoecium, stamen and leaf development in a dose-dependent manner, controlling apical-basal patterning. Promotes style and stigma formation, and influences vascular development during gynoecium development. May also have a role in the formation and/or maintenance of the shoot apical meristem (SAM). Regulates anther dehiscence and floral development. {ECO:0000269|PubMed:16740146, ECO:0000269|PubMed:20706774}. |
