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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G189300.1.p |
Common Name | GLYMA_14G189300, LOC100778903 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NAC |
Protein Properties |
Length: 591aa MW: 65849.9 Da PI: 4.638 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G189300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 170.1 | 7e-53 | 21 | 147 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88
lp GfrF+Ptdeel+++yL+ k++g++ ++ vi+e+d++k+ePwdLp + v++++ ew+fF+++d+ky++g+r nrat++gyWkatgk
Glyma.14G189300.1.p 21 LPLGFRFRPTDEELIDYYLRSKINGNSDDV-WVIREIDVCKWEPWDLPdlSVVRNKDPEWFFFCPQDRKYPNGHRLNRATNHGYWKATGK 109
699************************999.89**************96447777888******************************** PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
d++++s +++l+g+kktLvfy+grapkg++t+Wvmheyr
Glyma.14G189300.1.p 110 DRKIKS-GSTLIGMKKTLVFYTGRAPKGKRTNWVMHEYR 147
******.99*****************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 591 aa
Download sequence Send
to blast |
MGAVVECYPP PRTAVLSLNT LPLGFRFRPT DEELIDYYLR SKINGNSDDV WVIREIDVCK 60 WEPWDLPDLS VVRNKDPEWF FFCPQDRKYP NGHRLNRATN HGYWKATGKD RKIKSGSTLI 120 GMKKTLVFYT GRAPKGKRTN WVMHEYRPTL KELEGTNPGQ NPYVLCRLFK KQDESLEASN 180 GDDVERTAST PTTANYCPDE IQSDSALVPA SSSQVTEDDK PLPVISENSE EAISNIITPG 240 DIHSDECDAP DAQYQIVEPV AEEDQLLSVD IFYDPTNQQL DDKLFSPVHA HFPADFYYQA 300 NNQSELQYGT SENISEFFDS VVNWDSFSYA TSSLDLGSSF LNPKDNGSGS DSDVEMANML 360 HLQALHDYPK EAVEEKFNVG LFQNNPQMAF SNDGPMGQVH NVANYCEQPR NFDAFVNGDT 420 GIRIRTRHGR NEQPNMNMMI QSQGIAPRRI RLGVVRRPLG SQETAKDGSC ACAPEDHNSK 480 TIISAEKKAS ENHAADESST VSDESSTVTD DSDEPEEASP KSTDPRKISQ QHVATAESIS 540 GSKDLLVSRR GCYTSKVSSN CAMWSYVLAV SATVLVSAIL LVNIWAYVRS *
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 7e-45 | 16 | 175 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-45 | 16 | 175 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-45 | 16 | 175 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-45 | 16 | 175 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swm_B | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swm_C | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swm_D | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swp_A | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swp_B | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swp_C | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3swp_D | 8e-45 | 16 | 175 | 15 | 172 | NAC domain-containing protein 19 |
3ulx_A | 7e-45 | 12 | 174 | 7 | 171 | Stress-induced transcription factor NAC1 |
4dul_A | 7e-45 | 16 | 175 | 12 | 169 | NAC domain-containing protein 19 |
4dul_B | 7e-45 | 16 | 175 | 12 | 169 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX569045 | 0.0 | JX569045.1 Glycine max NAC transcription factor (NAC012) mRNA, complete cds. |