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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.14G171500.1.p |
| Common Name | GLYMA_14G171500, LOC100781774 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
ERF |
| Protein Properties |
Length: 313aa MW: 34546.6 Da PI: 6.7258 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.14G171500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 65.4 | 1.2e-20 | 150 | 199 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a+ +l+g
Glyma.14G171500.1.p 150 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYRLRG 199
59******9.**********965...5*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MAATMNFYNG TSQEQVESDP FRGELMEVLE PFMKTSPSST TPSIILSSDS PSSSSFNFPS 60
SSLLSPHPNF YTHTPPPSYL LQSQQSLIGF EQPPSSLLGL NHLSPSQISQ IQAQIEAQQS 120
QNQNPHSLNF LGPKPVPMKH VGGPPKPTKL YRGVRQRHWG KWVAEIRLPK NRTRLWLGTF 180
DTAEEAALAY DKAAYRLRGD FARLNFPSLK GSCPGEEYKP VHSAVDAKLD AICANLAEMQ 240
KQGKTEKGAR SAKKSKQGPN QEAKPEPQAS AESEGSADSS PLSDLTFDVT EPQWEHFNLQ 300
KFPSYEIDWD SL*
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| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.1187 | 0.0 | cotyledon| flower| hypocotyl| leaf| meristem| root| seed coat| somatic embryo| stem |
| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in roots and leaves. Also detected in flowers and stems. {ECO:0000269|PubMed:9192694}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Publications
? help Back to Top |
- Pati A,Vasquez-Robinet C,Heath LS,Grene R,Murali TM
XcisClique: analysis of regulatory bicliques.
BMC Bioinformatics, 2006. 7: p. 218
[PMID:16630346] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Iwase A, et al.
WIND1-based acquisition of regeneration competency in Arabidopsis and rapeseed.
J. Plant Res., 2015. 128(3): p. 389-97
[PMID:25810222] - Ikeuchi M, et al.
PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.
Nat Plants, 2015. 1: p. 15089
[PMID:27250255] - Iwase A, et al.
WIND1 Promotes Shoot Regeneration through Transcriptional Activation of ENHANCER OF SHOOT REGENERATION1 in Arabidopsis.
Plant Cell, 2017. 29(1): p. 54-69
[PMID:28011694]
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