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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G154400.1.p |
Common Name | GLYMA_14G154400, LOC100782308, W2 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 362aa MW: 40500.9 Da PI: 7.0681 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G154400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 54.1 | 3.5e-17 | 45 | 92 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEde l++++++ G g+W+t +++ g+ R++k+c++rw +yl
Glyma.14G154400.1.p 45 RGPWTPEEDEVLANYINKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 92
89******************************99************97 PP
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2 | Myb_DNA-binding | 46.5 | 8.4e-15 | 103 | 143 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
Glyma.14G154400.1.p 103 PDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 143
89***************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MRNPSLPTLA TTKTKVKNNS NKSTNNNNNI GTNYSPCCNN VGLKRGPWTP EEDEVLANYI 60 NKEGEGRWRT LPKRAGLLRC GKSCRLRWMN YLRPSVKRGH IAPDEEDLIL RLHRLLGNRW 120 SLIAGRIPGR TDNEIKNYWN THLSKKLINQ GIDPRTHKPL NPPSIAVPSS STTSTIPPSK 180 PPPVIITNNN INPFHHDLTN MFNQGVHLNH LGQHHQPPPL SNPCDNHNPV PAAATDDVSA 240 MGFMDNNNED CNNDGININY YSDDVFSSFL NSLINDDAFE AQQQQHHVQT EIPTPSERSI 300 NPLPCDDRVD DHHLGSITTA SASQGYDDEL GVLWESPLVS ATFSQHVNDH ITKRVHDHHN 360 Q*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Siliques. {ECO:0000269|PubMed:9839469}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1 or BHLH042/TT8. {ECO:0000269|PubMed:15361138}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB597932 | 0.0 | AB597932.1 Glycine max W2 mRNA for R2R3 MYB transcription factor, complete cds, cultivar: Harosoy. |
Publications
? help Back to Top |
- Takahashi R,Benitez ER,Oyoo ME,Khan NA,Komatsu S
Nonsense mutation of an MYB transcription factor is associated with purple-blue flower color in soybean. J. Hered., 2011 Jul-Aug. 102(4): p. 458-63 [PMID:21566002] - Ranocha P,Francoz E,Burlat V,Dunand C
Expression of PRX36, PMEI6 and SBT1.7 is controlled by complex transcription factor regulatory networks for proper seed coat mucilage extrusion. Plant Signal Behav, 2014. 9(11): p. e977734 [PMID:25531128]
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