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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.14G084300.1.p |
| Common Name | GLYMA_14G084300, LOC100785871 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
NAC |
| Protein Properties |
Length: 279aa MW: 31253.3 Da PI: 5.1194 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.14G084300.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 83.9 | 3.1e-26 | 9 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgy 82
lppG+rF P++e lv +yL+kk e+++ + ++ i+e+d+y+++P +Lp + +k+++k+w+ ++k+ k+ ++++r++ksg+
Glyma.14G084300.1.p 9 LPPGYRFYPSEEVLVGYYLTKKNENREegFYGSDLIRELDLYDHDPFELPdAacfsyGYKGRKKHWFCYAKETKR----RNRKRKVKSGF 94
79*********************999966566688**************95377754444455566666555443....34566789*** PP
NAM 83 Wkatgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmheyrl 128
W +g+ ++++++ ++ + + + +vfy g + +++ +tdW++ ey+l
Glyma.14G084300.1.p 95 WLRKGRVRDICDNrDDVVLATMTRFVFYVGnSLKNAARTDWILYEYAL 142
***********9844555678889****874668889*********87 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MEDRAHAALP PGYRFYPSEE VLVGYYLTKK NENREEGFYG SDLIRELDLY DHDPFELPDA 60
ACFSYGYKGR KKHWFCYAKE TKRRNRKRKV KSGFWLRKGR VRDICDNRDD VVLATMTRFV 120
FYVGNSLKNA ARTDWILYEY ALVDRVLASF VLCRVVSKPP HQNSPSEIGL SCCAEESVGV 180
AVRQVGVQCD GCAESDVVEA KVCDDGFVNR ENEIAENPIR CGGEHGDPAA PVSVAPGSQP 240
ERLSGLPSGS ALFVEAMTSQ QLMLSIQEED FIELNDIA*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 2e-17 | 5 | 158 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 2e-17 | 5 | 158 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 2e-17 | 5 | 158 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 2e-17 | 5 | 158 | 13 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 3e-17 | 5 | 158 | 16 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 2e-17 | 5 | 158 | 13 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 2e-17 | 5 | 158 | 13 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
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| No. |
Start |
End |
Sequence |
| 1 | 69 | 88 | RKKHWFCYAKETKRRNRKRK |
| 2 | 82 | 88 | RRNRKRK |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.268 | 0.0 | hypocotyl| meristem| root| seed coat| somatic embryo |
